Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01235 ATGGCTGATGATTTTTTGAACAACTTTAAGATTCCGGATTACATTCTTGTACCGGAATCCAAGGTTGAGAAATGCGATGAATCTGGTCTTGTCGTGCCTGTGTGTCCTGTGTTGGTTTTTGTTAATTCCAAGAGTGGTGGTCAGCTTGGAGGTGACCTGTTACAAACATATCGTACACTTCTTAGTGAAAAACAGGTCTTTGATTTGGGGGAAAATGCTCCTGATAAGGTGCTTAGAACAATCTATGCTAATTTGGAAAGCCTCAAGAAAAGGGGTGATGAATTTGCTATAAAGATCATGGAGAAGTTGAGGTTAATTGTTGCAGGCGGAGATGGAACAGCAGGTTGGCTACTTGGAGTTATTTGTGATCTCAAATTATCTCATCCGCCGGCAATAGCTACTGTCCCCCTCGGCACCGGGAATAATCTACCTTTTGCGTTTGGTTGGGGGAAGAAGAACCCGGGAACAGATCAACGCTCAGTTGAGGCATTTTTAGATCAAGTCATGAAGGCTAAAGAAATGAAAATAGACAACTGGCATATTCTTATGAGGATGAGAGCTCCAAAAGAAGGTTCCTGTGATCCAATTGCGCCACTTGAGCTGCCACATTCTTTGCATGCCTTCCATCGTGTATCAGACACAGATGAACTCAATATGGAAGGTTGCCACACTTTTCGCGGGGGATTTTGGAATTACTTCAGCATGGGTATGGATGCTCAAGTATCTTATGCATTTCATTCTGAACGAAAGATGAATCCCGAAAAATTCAAAAATCAGTTGGTGAATCAGAAAACGTATGCTAAGCTTGGATGTACACAAGGATGGTTTTTTGCCTCTTTAATTCATCCTTCTTCCAGGAACATAGCACAACTTACAAAAGTAAAGATCATGCAAAAACCTGGTCAATGGCAAGACCTGTACATACCTCCCAGCATCAGGTCAATTGTATGTCTTAACTTGCCAAGCTTTTCTGGTGGATTCAATCCATGGGGTACACCGAACCAGAGGAAGCAACGCGATAGAGATTTAACACCACCATATGTGGATGATGGCCTTATAGAAGTTGTTGGTTTTAGAGATGCATGGCATGGGCTTGTTTTGCTTGCTCCAAAAGGACATGGAACTCGACTTGCTCAGGCACATAGAATCCGGTTTGAGTTTTGCAAAGGTGGAGCGGATCATACATTCATGAGGATCGACGGAGAACCTTGGAAACAACCTCTTCCAGTTGATGATGATACTGTTCTGGTAGAAATTACTCACCATGGTCAGGTTAACATGCTTGCCACTCCTCTTTGCAAGTCTCAAAGCGTTTATGATCCGTCATCACCACACCATGACAATGAAGAAGATGAGAGTGATGAAGAAGAAGACTCTATAGCAGAGGAATATCGGAAGTTTGGTGCAGCGGATACATTTAGAATCCCAGATGATGTTGATATTTCTCATCTTAGTTAG 1458 0.4252 MADDFLNNFKIPDYILVPESKVEKCDESGLVVPVCPVLVFVNSKSGGQLGGDLLQTYRTLLSEKQVFDLGENAPDKVLRTIYANLESLKKRGDEFAIKIMEKLRLIVAGGDGTAGWLLGVICDLKLSHPPAIATVPLGTGNNLPFAFGWGKKNPGTDQRSVEAFLDQVMKAKEMKIDNWHILMRMRAPKEGSCDPIAPLELPHSLHAFHRVSDTDELNMEGCHTFRGGFWNYFSMGMDAQVSYAFHSERKMNPEKFKNQLVNQKTYAKLGCTQGWFFASLIHPSSRNIAQLTKVKIMQKPGQWQDLYIPPSIRSIVCLNLPSFSGGFNPWGTPNQRKQRDRDLTPPYVDDGLIEVVGFRDAWHGLVLLAPKGHGTRLAQAHRIRFEFCKGGADHTFMRIDGEPWKQPLPVDDDTVLVEITHHGQVNMLATPLCKSQSVYDPSSPHHDNEEDESDEEEDSIAEEYRKFGAADTFRIPDDVDISHLS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01235 485 MobiDBLite consensus disorder prediction 436 460 - -
Trre7g01235 485 PIRSF DAG_kinase_plant 2 434 IPR016961 GO:0004143
Trre7g01235 485 Gene3D - 228 411 - -
Trre7g01235 485 FunFam diacylglycerol kinase 228 409 - -
Trre7g01235 485 SMART dagk_c4b_2 231 403 IPR000756 GO:0004143|GO:0007205
Trre7g01235 485 Gene3D - 36 182 IPR017438 -
Trre7g01235 485 Pfam Diacylglycerol kinase accessory domain 229 403 IPR000756 GO:0004143|GO:0007205
Trre7g01235 485 Pfam Diacylglycerol kinase catalytic domain 36 161 IPR001206 GO:0016301
Trre7g01235 485 SMART dagk_c4a_7 36 179 IPR001206 GO:0016301
Trre7g01235 485 FunFam Diacylglycerol kinase 35 178 - -
Trre7g01235 485 PANTHER DIACYLGLYCEROL KINASE 30 432 IPR037607 GO:0004143|GO:0007165
Trre7g01235 485 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 32 185 IPR001206 GO:0016301
Trre7g01235 485 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 35 426 IPR016064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01235 Trre-Chr7 8719894 8725385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01235 4 478 Acyl Lipid Metabolism Gene Families AT2G20900 77.035 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01235 K00901 - gmx:100817198 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01235 7 8719894 8725385 Trre7g01235 7 8719894 8725385 ECH
Trre11g04009 11 53337817 53346755 Trre7g01235 7 8719894 8725385 PCT