Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04009 ATGGCGTCACGCAATTCCGAATTCCTGAAGAATTTTTGGATCCCGAATCACGTTCTTGTGCCGGATTCTAAGGTTGATGATGGTGAGATTGATGGTGATGGACCAAAGTGTCCGGTGCTTGTTTTTGTTAACTCTAAGAGTGGTGGTCAATTAGGTGGAGAACTCTTGAAAACCTACCGTTCACTTCTCAAAGAAAAACAGGTTTTTGATTTGGGGGAAGAGACTCCTGATAAGGTTTTGAGCAGAATTTATGCTAATTTGGAAAACTTGAAGGTTCAGGGTGATCAACTTGCTATATGGACTATGGAGAGATTGAGATTAATTGTTGCAGGGGGTGATGGAACAGCTGGCTGGTTGCTTGGAGTTGTTTGTGATCTCAAATTAGCTCATTCGCCTCCCATAGCTACGGTTCCCTTGGGCACAGGAAATAATCTACCATTTGCATTTGGTTGGGGGAAGAAGAACCCGGGAACAGATGAACAATCTGTTTTGTCATTTCTTGATAAAGTAATGAAGGCTAAGGAAATGAAAATTGATAACTGGCACCTTCTCATGCGGATGAAGACTCCGAAACACGGTGCCTGTGATCCAATTGCTCCTCTTGAGTTACCTCATTCTCTGCATGCCTTCCATCGAGTATCTGAGACAGATGAACTTAATATAGAAGGTTGCCATACATTTCGTGGGGGATTTTGGAATTACTTCAGCATGGGAATGGATGCTCAAGTGTCCTATGCATTTCATTCTGAACGTAAATTGCACCCTGAAAAATTCAAAAATCAGTTGGTTAATCAGAGCACTTATGCTAAGCTCGGATGCACACAAGGATGGTTTTTAGCTTCACTAACCCATCCTCCGAACAGGAACGTAGCACATATGGGAAAAGTCAAAGTCATGAAAACACCTGGTCATTGGGAAGATCTAGAAATACCTTCCAGCATCCGATCAATTGTGTGCCTTAACTTGCCTAGCTTTTCTGGTGGATTTAACCCATGGGGTACACCATGCAGTAGGAGGCGTCGTGATAAAGGTTTTACACCTCCATTTGTAGATGATGGTCTTATTGAAGTAGTTGGTTTTAGAGATGCGTGGCATGGACTTGTTTTACTTGCTCCAAATGGACATGGAACTCGCCTTGCTCAGGCAAAAAGAATCCGCTTTGAGTTTCATAAAGGTGCAGCAGATCATACATACATGAGGATTGATGGGGAACCTTGGAAGCAACCTCTCCCAGTTGATGACGATACTGTTTTGGTAGAGATATCTCACCATGGCCAGGTTAACATGCTTGCTACTCATGAGTCCAAGTCTAAAAGTGTGCGTGATCCATCATCACCTCATCATAATGATGCTGAGGAAGATGATGATGATGAAGACAGTTTAGCAGACGAATTTCGAAAATTTGGTGCAGCAGAAACTTTCAAAATCCCAGATGAGGTAGATATTGCTCATCTTAGTTAG 1461 0.4257 MASRNSEFLKNFWIPNHVLVPDSKVDDGEIDGDGPKCPVLVFVNSKSGGQLGGELLKTYRSLLKEKQVFDLGEETPDKVLSRIYANLENLKVQGDQLAIWTMERLRLIVAGGDGTAGWLLGVVCDLKLAHSPPIATVPLGTGNNLPFAFGWGKKNPGTDEQSVLSFLDKVMKAKEMKIDNWHLLMRMKTPKHGACDPIAPLELPHSLHAFHRVSETDELNIEGCHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFKNQLVNQSTYAKLGCTQGWFLASLTHPPNRNVAHMGKVKVMKTPGHWEDLEIPSSIRSIVCLNLPSFSGGFNPWGTPCSRRRRDKGFTPPFVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAKRIRFEFHKGAADHTYMRIDGEPWKQPLPVDDDTVLVEISHHGQVNMLATHESKSKSVRDPSSPHHNDAEEDDDDEDSLADEFRKFGAAETFKIPDEVDIAHLS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04009 486 SMART dagk_c4b_2 233 405 IPR000756 GO:0004143|GO:0007205
Trre11g04009 486 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 34 187 IPR001206 GO:0016301
Trre11g04009 486 PANTHER DIACYLGLYCEROL KINASE 33 435 IPR037607 GO:0004143|GO:0007165
Trre11g04009 486 PIRSF DAG_kinase_plant 2 436 IPR016961 GO:0004143
Trre11g04009 486 FunFam diacylglycerol kinase 230 411 - -
Trre11g04009 486 FunFam Diacylglycerol kinase 37 180 - -
Trre11g04009 486 Pfam Diacylglycerol kinase accessory domain 231 405 IPR000756 GO:0004143|GO:0007205
Trre11g04009 486 MobiDBLite consensus disorder prediction 435 450 - -
Trre11g04009 486 SMART dagk_c4a_7 38 181 IPR001206 GO:0016301
Trre11g04009 486 Gene3D - 37 183 IPR017438 -
Trre11g04009 486 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 36 412 IPR016064 -
Trre11g04009 486 Gene3D - 230 413 - -
Trre11g04009 486 MobiDBLite consensus disorder prediction 432 464 - -
Trre11g04009 486 Pfam Diacylglycerol kinase catalytic domain 38 163 IPR001206 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04009 Trre-Chr11 53337817 53346755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04009 6 479 Acyl Lipid Metabolism Gene Families AT2G20900 75.783 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04009 K00901 - gmx:100813809 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04009 11 53337817 53346755 Trre11g04009 11 53337817 53346755 ECH
Trre11g04009 11 53337817 53346755 Trre7g01235 7 8719894 8725385 PCT