Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01217 ATGAGCCGCTACGATCCAAACCCTTTCGAAGAAGAAGACCTTCACGTCAATCCCTTTTCGGATGGAACAGCCAAAGGAACGGGGCCAAGTTATGGCGGGGGAGCATTTTACACTACCAACCCTGGAAGCGTTCCTTCTGCTACCTCAAGACTCTCACCCCTTCCTCACGAGCCTTATGATCGTGGGGTAACTACTGACATCCCTCTCGATAGCTCAAAGGATCTCAAAGCAAAGGAGAAGGAACTTCAAGCTAGAGAGACTGAATTGAAAAAAAGGGAACAGGAACTAAAACGTAAAGAGGACGCCATAGCACGAGCTGGTATAATCATAGAGGAAAAAAATTGGCCACCTTTTTTCCCCATCATTCATCATGACATTGGAAAGGAAATACCGATACATCTTCAAAGGATGCAGTATGTTGCATTCACAACATGGTTAGGTTTGGTTCTGTGTCTTCTGTGGAATATAGTGGCAGTTACTACTGCTTGGATCAAAGGAGAAGGTCCAACCATTTGGTTTCTCGCTATTATATATTTCATTTCTGGTGCTCCAGGATCCTATGTAATGTGGTATCGCCCCCTTTATCGCGCTATGAGGACAGACAGTGCTCTGAAGTTTGGCTGGTTCTTTGCCGCTTACCTGTTGCACATTGGCTTTTGCATTTTTGCTACAGTTGCTCCACCAATTATCTTCAAAGGAAAATCTCTCACAGGTATTTTGGCTGCGATTGATGTGATAGACGGCAGTGCATTGGTTGGGATATTCTACTTCATCGGGTTTGGACTTTTCTGTCTCGAGTCACTGATGAGCGTCTGGGTTTTTCAGCAAGTATTGATGTACTTCCGTGGAAGTGGCAAGGCTGCAGAGCTGAAGCGAGAGGCAGCTAGAGGGACGATGATGGCAGCTCTATAA 912 0.4561 MSRYDPNPFEEEDLHVNPFSDGTAKGTGPSYGGGAFYTTNPGSVPSATSRLSPLPHEPYDRGVTTDIPLDSSKDLKAKEKELQARETELKKREQELKRKEDAIARAGIIIEEKNWPPFFPIIHHDIGKEIPIHLQRMQYVAFTTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVMWYRPLYRAMRTDSALKFGWFFAAYLLHIGFCIFATVAPPIIFKGKSLTGILAAIDVIDGSALVGIFYFIGFGLFCLESLMSVWVFQQVLMYFRGSGKAAELKREAARGTMMAAL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01217 303 MobiDBLite consensus disorder prediction 1 18 - -
Trre7g01217 303 MobiDBLite consensus disorder prediction 1 70 - -
Trre7g01217 303 Coils Coil 72 102 - -
Trre7g01217 303 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 300 IPR007273 GO:0015031|GO:0016020
Trre7g01217 303 MobiDBLite consensus disorder prediction 33 50 - -
Trre7g01217 303 Pfam SCAMP family 112 283 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01217 Trre-Chr7 8612000 8617750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01217 66 303 Miscellaneous Gene Families AT2G20840 83.613 3.23e-141 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01217 K19995 - gmx:100796729 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04046 11 53526334 53529455 Trre7g01217 7 8612000 8617750 PCT