Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00458 ATGACAGACACAAAGCACAAAACTGTCGTCACGTGGCGCAACATCCCCAACCTCAACTCCACCTCCCACGACGTCGTTTCACCCAACCACCGCTTCAACGACGCCGTTTTCACTTTCACCGACGCAAACACCATTCGAACCAAATTCGCCACCATCTCCACATCACAAACAAAACCGAACAACGAATTCACTCCGACGCCGGCTCAGCTTCTAAATCACCCGCTCGCCGTTGTCGCACTTGTTCCCAAAGATGCTGCATTGTTTCTCGCCGGAGCTGTTGCCGGTGCTGCTGCTAAAACCGCTACTGCTCCACTCGATCGAATCAAGCTTCTCATGCAGACTCATGGAGTGCGAATTGGACATGAAAGTGCGAAGAAGACAATTGGTTTCATTGAGGCAATAACAATGATAGGGAAGGAAGAAGGTATTAGAGGTTACTGGAAGGGTAACCTACCACAGGTTATTAGAGTTATACCTTATAGCGCCGTTCAGCTCTTTGCTTATGAAATTTATAAGAAAATATTCAAGGGAAAAAGCAATGAGCTCTCTGTTGTGGGAAGACTTGCAGCAGGTGCTTTTGCAGGCATGACATCAACTTTTATAACTTACCCTTTAGATGTCCTGAGATTACGATTAGCTGTTGAACCTGGGTGCCGAACAATGACGGAGGTTGCCTTGAGCATGGTAAAAGAGGAAGGTTTTGCATCTTTCTACTATGGCCTTGGACCTTCTCTTATTGGAATAGCTCCATATATTGCAGTTAACTTTTGTGTTTTTGACTTATTAAAGAAGTCGTTGCCAGAGAAATATCAGAAGAGAACTGAAACATCTCTAGTCACCGCCGTGCTTTCAGCATCTCTTGCCACACTTACATGCTATCCTCTGGATACAGTGCGAAGACAAATGCAACTGAAGGGTACCCCTTATAAGACAGTATTAGACGCCATTTCAGGTATTGTGGCACGGGATGGAGTTATTGGTTTGTATCGGGGATTTGTGCCCAATGCTTTAAAAAACCTACCAAACAGCAGCATCAGGCTTACTACATATGACATTGTCAAACGCCTTATTGCAGCTAGTGAGAAAGAGTTTCAAACAATTGCCGAGGAAAACCGCAACAAACTAAAGAAACACCCATAA 1140 0.4482 MTDTKHKTVVTWRNIPNLNSTSHDVVSPNHRFNDAVFTFTDANTIRTKFATISTSQTKPNNEFTPTPAQLLNHPLAVVALVPKDAALFLAGAVAGAAAKTATAPLDRIKLLMQTHGVRIGHESAKKTIGFIEAITMIGKEEGIRGYWKGNLPQVIRVIPYSAVQLFAYEIYKKIFKGKSNELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGCRTMTEVALSMVKEEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLVTAVLSASLATLTCYPLDTVRRQMQLKGTPYKTVLDAISGIVARDGVIGLYRGFVPNALKNLPNSSIRLTTYDIVKRLIAASEKEFQTIAEENRNKLKKHP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00458 379 FunFam Envelope ADP,ATP carrier protein 84 362 - -
Trre7g00458 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 82 174 IPR018108 -
Trre7g00458 379 Gene3D Mitochondrial carrier domain 85 357 IPR023395 -
Trre7g00458 379 PRINTS Mitochondrial carrier protein signature 149 169 IPR002067 GO:0055085
Trre7g00458 379 PRINTS Mitochondrial carrier protein signature 100 114 IPR002067 GO:0055085
Trre7g00458 379 PRINTS Mitochondrial carrier protein signature 281 303 IPR002067 GO:0055085
Trre7g00458 379 PRINTS Mitochondrial carrier protein signature 87 100 IPR002067 GO:0055085
Trre7g00458 379 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Trre7g00458 379 PRINTS Mitochondrial carrier protein signature 238 256 IPR002067 GO:0055085
Trre7g00458 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 272 356 IPR018108 -
Trre7g00458 379 PANTHER SOLUTE CARRIER FAMILY 25 62 357 - -
Trre7g00458 379 Pfam Mitochondrial carrier protein 87 178 IPR018108 -
Trre7g00458 379 Pfam Mitochondrial carrier protein 276 358 IPR018108 -
Trre7g00458 379 Pfam Mitochondrial carrier protein 181 268 IPR018108 -
Trre7g00458 379 SUPERFAMILY Mitochondrial carrier 85 352 IPR023395 -
Trre7g00458 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 265 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00458 Trre-Chr7 2869165 2871436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00458 5 374 Organic Solute Cotransporters AT3G51870 68.000 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00458 K14684 - gmx:100796878 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00458 7 2869165 2871436 Trre13g01621 13 13264964 13269570 PCT