Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00340 ATGGAACCTACCGTAGCGAAGCCTGGCTTCCTTCGGAACGTTCTGGTACGATTACTTCTCTTCGGCGTTTTCGTCGTCATTATTCGATTTGCTTACGTCATCACTATCGCCGGCGAAACCTGCAACGTCGGAGATTTCTGTTTTTTCTCTTCGCCGGAGAAAATTAATGTCGCCGTTACCGGATCTAGTTCCGGTGCCACCGCCGGTGCACTCTCTGTTCGATCCTCATCCGAATTAGCTTTACCGGTGCATCATGCAAGCAAAGAATGGATCAATGGAGTTCGGTTTTACTCATCCGTTTTCCAGAATATGATCGTCGCCGGTTATCTTTCACCGGAGGCGAAGTCTTTGTGCGTTGATACGCCGACTGGAAGGGATGTGTTTGCGTTGAAGGAGATCGGTGTTGTTGATTCGGTTGGGATCTCGAAGAAGGCGTTGAAACCGTTGGTGAAATCCGGTGAAGGTCATAGGATTCCGTTTGGTAATAACACGTTTGATTTTGTGTTTTCTGGTGATGGAGGATTGGAGAGAACGGTGAAACCGTTTGAATTTGCGATGGAAATCGCGAGGACGCTGAAACCCGAAGGGTTTGCAGTGTTCCATGTAAAGACTAAAGATTCTTACAGTTACAATTCATTTGTTGATTTGTTTAAATTTTGTTGCAAAGTAGTGAAATTCAATGATATTCAAGGTTTCGATGATTCGATGCCTGAGATAAGAGAAATCGTCGTGAAGAAAATCGGTAATAGTAATATTGATTCTGATATTGAATTGATTGAGGATAAGAAGTGTTCTGTTGCAGGGTATAAGAGAGAATTGGTTAAGAATGCTGAGGTATTGATTGAAGAGGAACCATTGAAACCATGGATAACCCTAAAGAAGAATGTGAAGAACATAAAGTATGCATCTTCAATGGTTGATATAAGCTTTAAGAGTAGATATGTGTATGTTGATGTTGGAGCTAGAAGCTATGGTTCAAGCATTGGAAGCTGGTTTAAGAAACAGTATCCAAAACAGAATAAAACTTTTCATGTTTATGCAATTGAAGCTGATAAAGCTTTTCATCAAGAGTATGTGATGAAAAAAGGGGTAACTTTGTTACCTTATGCTGCATGGGTTAAGAATGAGAGTTTGGTTTTCGAAATTAACAACGACCCGGGTGATAAAAAGAAAGAGAAAGCAGGGAGAGGAATGGGAAGGATTCAACCCTTGGATTCTCAAGGTGGTGGCGGTGGCGGTGTTCATAAGATACAAGGGTTTGATTTTGCTGAATGGTTGAAGAACACGGTTACGATGAACGATTTCGTTGTGATGAAAATGGATGTTGAAGGTACTGAATTTGATTTGATTCCTAGGTTGTTTGAAACCGGTGCGATTTGTTTGGTTGATGAGATTTTTCTCGAGTGTCATTATAATAGATGGCAGAGGTGTTGTCCTGGACAAAGAAGTCCTAAGTATGAGAAAACATATGATCAATGTTTGCAGCTTTTCAATTCTCTTAGACAAAGTGGTGTTCTTGTTCATCAATGGTTTTAG 1536 0.4089 MEPTVAKPGFLRNVLVRLLLFGVFVVIIRFAYVITIAGETCNVGDFCFFSSPEKINVAVTGSSSGATAGALSVRSSSELALPVHHASKEWINGVRFYSSVFQNMIVAGYLSPEAKSLCVDTPTGRDVFALKEIGVVDSVGISKKALKPLVKSGEGHRIPFGNNTFDFVFSGDGGLERTVKPFEFAMEIARTLKPEGFAVFHVKTKDSYSYNSFVDLFKFCCKVVKFNDIQGFDDSMPEIREIVVKKIGNSNIDSDIELIEDKKCSVAGYKRELVKNAEVLIEEEPLKPWITLKKNVKNIKYASSMVDISFKSRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFHVYAIEADKAFHQEYVMKKGVTLLPYAAWVKNESLVFEINNDPGDKKKEKAGRGMGRIQPLDSQGGGGGGVHKIQGFDFAEWLKNTVTMNDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSPKYEKTYDQCLQLFNSLRQSGVLVHQWF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00340 511 PANTHER METHYLTRANSFERASE 1 511 - -
Trre7g00340 511 MobiDBLite consensus disorder prediction 389 410 - -
Trre7g00340 511 Pfam Methyltransferase FkbM domain 318 477 IPR006342 -
Trre7g00340 511 Pfam Methyltransferase domain 151 200 IPR013216 GO:0008168
Trre7g00340 511 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 153 211 IPR029063 -
Trre7g00340 511 Gene3D Vaccinia Virus protein VP39 298 475 IPR029063 -
Trre7g00340 511 Gene3D Vaccinia Virus protein VP39 131 246 IPR029063 -
Trre7g00340 511 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 301 453 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00340 Trre-Chr7 2192136 2193671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00340 - - gmx:100811015 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01750 13 14494601 14496172 Trre7g00340 7 2192136 2193671 PCT