Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01750 ATGAAAAAGAAGTGCACAGTGGCTACCATGGAACATACCGCAGCGAAACCTAGCTCTGTCCAGAACCTTCTAATACGGTTACTTCTCTCCGGCGTTTTTATCATCGCTATTCGTTTCACTTACGTCATCTCCATCGCCGGCGAATCATGTAACGTCTCCGATTTCTGCTTCTTCTCACTTCCGGAGACATTCAGCTTAGCTATTTCCGGTAATGATCCTATCTCCGTCGAGTCTGGTTCCGGCGCCGGCCGTGGAAACTCGTCGTTATCGGAGCTTTATTCTAGCAAAGAGTGGCTTGACAGTGTAAGTTTCTACTCGTCAGTTTTTCATGATTTGATCGGCGGCGGTTTCCTTGCGTCGGAGTCAAAGTCTCTTTGCGTTGAAACGCCGACCGGACGTGATGTTTTCGCTCTGAGAGAAATCGGCGTCAAAAACGCCGTCGGAATCTCAAAAAAATCAGTTAAGCCGCTTGTGAAATCAGGAACGGGTGACCGGATTCCGTTCGGAGACAGTTACTTTGATTTTGTGTTCTCCGGTGAAGGCTCATTCGCGAAGTCGGCCAAGCCGGCTGTTTTCGCAGCGGAGATTGCTCGGACGCTGAAACCGGGAGGATTCGCGGTATTCCATTTCACAAACACTAAAGATACTTATAGTTTCAATTCATTCCTTGATTTGTTTCATTGTTTTAAAGTAATGAAATTGCATGTTTTAGAAGGGTTTGATTCTTCAATGTCTTATATACATGAAACTGTATTGAAAAATGAGTGTGTTGATTATGGTGCTGGCAAATTTGATAGTGATTATGATTCACATTCAAATGGAAATTGTTATGTTCCTGGGTATAAGAAAGATTTGATTAGGATTGCTGAGCCTTTGATTGAAAAGGAACCATTGAAACCATGGATAACATTGAAAAAGAATATAATGAACATAAAGTATCTTTCTTCAATGGTTGATATAAGTTTCAAAAATAGGTATTTGTATGTTGATGTTGGAGCTAGAAGCTATGGTTCTAGTATAGGATCTTGGTTTAGGAAACAGTATCCTAAACAGAACAAGACATTTCATGTGTATGCAATTGAAGCTGATAAGACTTTTTATAAGGAGTATGGGTTGAAGAAAGGGCTTACTTTGATTCCTTATGCTGCTTGGGTGAAAAATGAGACTTTGGCTTTCGAGATTCATCGTGATCCGGGGGAGCATGTTGAGGTTAAAGGAAGAGGGATGGGTAGGATTCAGCCTTTGCAGACGACAGGGAAAGAGTTTGACGGGGAGGTGGAGAAGATACAGGGATTTGATTTTGCTAATTGGTTGAAGAACACGGTTTCGAAGAATGATTTTGTTGTGATGAAAATGGATGTCGAGGGTACTGAATTTGATCTCATTCCGAGGTTGTTTGAAACTGGGGCAATCTGTTTGATAGATGAGATTTTCCTTGAATGCCATTACAATAGGTGGCAGAGATGTTGTCCTGGTCAGAGGAGTTCAAAGTATGAGAAAACATATGATCAATGCTTAGAGCTCTTCAATTCTCTTCGACAAAGTGGAATTCTTGTTCATCAATGGTTTTAA 1572 0.4135 MKKKCTVATMEHTAAKPSSVQNLLIRLLLSGVFIIAIRFTYVISIAGESCNVSDFCFFSLPETFSLAISGNDPISVESGSGAGRGNSSLSELYSSKEWLDSVSFYSSVFHDLIGGGFLASESKSLCVETPTGRDVFALREIGVKNAVGISKKSVKPLVKSGTGDRIPFGDSYFDFVFSGEGSFAKSAKPAVFAAEIARTLKPGGFAVFHFTNTKDTYSFNSFLDLFHCFKVMKLHVLEGFDSSMSYIHETVLKNECVDYGAGKFDSDYDSHSNGNCYVPGYKKDLIRIAEPLIEKEPLKPWITLKKNIMNIKYLSSMVDISFKNRYLYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFYKEYGLKKGLTLIPYAAWVKNETLAFEIHRDPGEHVEVKGRGMGRIQPLQTTGKEFDGEVEKIQGFDFANWLKNTVSKNDFVVMKMDVEGTEFDLIPRLFETGAICLIDEIFLECHYNRWQRCCPGQRSSKYEKTYDQCLELFNSLRQSGILVHQWF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01750 523 Pfam Methyltransferase domain 159 208 IPR013216 GO:0008168
Trre13g01750 523 PANTHER METHYLTRANSFERASE 10 523 - -
Trre13g01750 523 Pfam Methyltransferase FkbM domain 330 489 IPR006342 -
Trre13g01750 523 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 313 481 IPR029063 -
Trre13g01750 523 Gene3D Vaccinia Virus protein VP39 311 490 IPR029063 -
Trre13g01750 523 Gene3D Vaccinia Virus protein VP39 141 252 IPR029063 -
Trre13g01750 523 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 161 228 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01750 Trre-Chr13 14494601 14496172 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01750 - - gmx:102670512 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01750 13 14494601 14496172 Trre13g01750 13 14494601 14496172 ECH
Trre13g01750 13 14494601 14496172 Trre7g00340 7 2192136 2193671 PCT