Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00281 ATGGAGGAATGCAACAACAATAGAGGAGAATTTCAACATCAATCTTCATCATCAAAATCAATTCAACAACAACAACATTCGCCATCGTTTCGAAGAAGAGAAAGCAAAGGTAATAATAGTAATGCACAGTTTACTTGGATTGGAAGCAACCGGTTAGTTTTGTGGCTAATTTTGATTACCCTTTGGGCTTATCTTGGTTTTTTTGTTCAATCTAAGTGGGAAAATTATGAAAATGAACAAGAACTTAAAGGATTTGATTTTCATCTTAATAATCATCAAGATTTGGTTATCAAAAAAAGTTCTTTAGTAGTTGATAATGAAAACGTTGGTTTGAAGAATAATCATAATCATTTGGATGTTGTATTGGCCAAGAAAGGAGAAAATGGTAAAAATGGCTCAAAGAAAAGTAAGAATAGAAGATCTTTGAGAAGTAAACACAAGAGAAAATTGAAAGTTGAGAGCAATATTGGTGATATAGATGAAAAGGAGTTAGAAAAAATTCCTCTTGTTGGTCCATTTGGTTCAATAGAGAACAAAATTTTGAAACTGAGTAGTACTAATAATAATGATAAGTGTTGTGGAAAATGTGACAAGAAAAGTGATTTTGCAAAAGTTGTTTTGTCAAAGAGGTTTGTGTTGATATTTCATGAACTTTCTATGACTGGAGCACCACTTTCAATGATGGAATTGGCAACTGAATTGATGAGTTGTGGAGCAAATGTTTCAGCTGTTGTTCTTAGTAAAAAAGGTGGTTTGATGCAAGAGCTTATTAGGAGACAGATTAAGGTGATTGATGATAAATTTGATCATAGCTTCAAGGCTGCAATGAAATCTGATCTTGTCATTGCTGGATCAGCTGTTTGTTCTTCATGGATAGAACAGTACATTGAATACTTTCCTTCTGGTGCAAGTAAAGTTGTTTGGTGGATTATGGAAAACCGAAGAGAGTACTTTGATCGTTCAAAACACCTTTTAAACAAAGTGAAGATGTTGGTTTTTCTTTCCGAATCGCAATCTAAGAAATGGCAAAAATGGTATGAAGAAGAAAACAGAAGATTTAGAGTCCAGCCTGCAATTGTTCCATTGTCTGTTAATGATGAACTTGCTTTCGCAGCCGGAATTCATTCCTCGAGTGCTTCCAATAAAATCAATGAGAAGAGGAAATTTTTGCGCGAAACAGTCCGAAAAGAATTAGGCTTGAATGATAATGATATGCTTGTGATATCTCTAAGTAGCATCAATCCTGGAAAGGGTCAGTTATTGTTTCTTGAATCAGCAAACTCAGTAATAGAAAATGAATCATTTCAAGAACATGATAAGAAAAAGCAAAATTCATCACTAGTTACTTTGGCTAGAAGATATCATATTAGAAAATTGTTGCCAATGTTGAAGGATAGCAATTCTATAAGCAGTAACCGTGGAAAAATGAAACAATCTCTGAAAATTTTGATCGGTTCTGTTGGATCAAAGAGTAACAAAGTGGAATATGTTAAAAGTATTTTAAGTTTCTTGTCACAACATTCAAACTTGTCAAAGTCAGTTTTGTGGACTCCAGCTACAACACATGTTGCCTCACTTTACTCTGCTGCTGATGTTTATGTCATAAACTCTCAGGCATTAGGAGAAACCTTTGGACGCGTAACAATAGAAGCAATGGCATTTGGTCTTCCGGTGTTAGGAACAGATGCTGGGGGAACAAAGGAAATTGTGGAGCATAATGTGACTGGTCTTCATCATCCTATTGGACGTAAAGGGAATCATATCCTTGCACAAAATCTTAGGTTTTTACTTGAAAACCAATTTGCAAGAGAGAAAATGGGAATGAATGGAAGAAAGAAAGTAGAAAGAATGTACTTGAAGCAACACATGTATAGTAAATTTGTAGAGGTTCTTGTTAGATGTATGAGGAGCAAATAA 1917 0.3443 MEECNNNRGEFQHQSSSSKSIQQQQHSPSFRRRESKGNNSNAQFTWIGSNRLVLWLILITLWAYLGFFVQSKWENYENEQELKGFDFHLNNHQDLVIKKSSLVVDNENVGLKNNHNHLDVVLAKKGENGKNGSKKSKNRRSLRSKHKRKLKVESNIGDIDEKELEKIPLVGPFGSIENKILKLSSTNNNDKCCGKCDKKSDFAKVVLSKRFVLIFHELSMTGAPLSMMELATELMSCGANVSAVVLSKKGGLMQELIRRQIKVIDDKFDHSFKAAMKSDLVIAGSAVCSSWIEQYIEYFPSGASKVVWWIMENRREYFDRSKHLLNKVKMLVFLSESQSKKWQKWYEEENRRFRVQPAIVPLSVNDELAFAAGIHSSSASNKINEKRKFLRETVRKELGLNDNDMLVISLSSINPGKGQLLFLESANSVIENESFQEHDKKKQNSSLVTLARRYHIRKLLPMLKDSNSISSNRGKMKQSLKILIGSVGSKSNKVEYVKSILSFLSQHSNLSKSVLWTPATTHVASLYSAADVYVINSQALGETFGRVTIEAMAFGLPVLGTDAGGTKEIVEHNVTGLHHPIGRKGNHILAQNLRFLLENQFAREKMGMNGRKKVERMYLKQHMYSKFVEVLVRCMRSK 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00281 638 MobiDBLite consensus disorder prediction 125 147 - -
Trre7g00281 638 Gene3D Glycogen Phosphorylase B; 503 618 - -
Trre7g00281 638 Gene3D Glycogen Phosphorylase B; 258 360 - -
Trre7g00281 638 PANTHER BNAA05G14870D PROTEIN 12 638 - -
Trre7g00281 638 MobiDBLite consensus disorder prediction 1 38 - -
Trre7g00281 638 Gene3D Glycogen Phosphorylase B; 361 430 - -
Trre7g00281 638 Gene3D Glycogen Phosphorylase B; 619 628 - -
Trre7g00281 638 MobiDBLite consensus disorder prediction 8 38 - -
Trre7g00281 638 Pfam Glycosyl transferases group 1 488 612 IPR001296 GO:0016757
Trre7g00281 638 Pfam Glycosyl-transferase family 4 208 376 IPR041693 -
Trre7g00281 638 CDD GT4_PimA-like 210 631 - -
Trre7g00281 638 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 214 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00281 Trre-Chr7 1891899 1895246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00281 32 636 Glycosyltransferase AT1G52420 53.344 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00281 - - cam:101493983 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00281 7 1891899 1895246 Trre7g00281 7 1891899 1895246 ECH
Trre11g04779 11 59064214 59067931 Trre7g00281 7 1891899 1895246 PCT