Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04779 ATGATTGTTGAGGAAAGGAAAATAATGGAAGAAAGTAGCAACAATAGAGGTGAATTTCAGGCTAGTTTAGCTAAACTTTCTTCATTGAGGTCAGGTGGAAGTTTTAAATCAACATTATCGGGAAGAACAACTCCGCGAAGTAATTCACCTTCGTTTCGGAGATTAAATACTAGTCGTACGCCGAGAAAAGATGGAAGGGGTCTTGGTGGTTCGGTGTTGTTTCGGAGCAATCGTGTGTTATTGTGGTTGCTTCTAATTACCCTATGGGCTTATCTTGGATTTTTTGTTCAGTCTAGGTGGGCACATAGTGATAAGAAAGAGGAATTTTCTGGCTTTGGAACCGGGCCAAGAAATACTGGTGTGGATGCTGATCTGAGTCTTCGTCGTGATTTGATTGCTAGTGATGACTCGTTGTCTGTTAATAATGAGACAGTTAGAAATAAAGGAGGGATTGGTAGAACAATAAATGTAGCTTTGGCAAAGAAAGAAAATGATGATGTTGATGATGTTCCATCTCCGAAAGTTAAAGCAAGCTCAAAGAAGAAGAAGAAGAGCAGGCGATCTTCGAAAGGTAAAGCTCGTGGTAAGAAGAAACCAACAGTGGAAGTTAAGATCAATGATATAGAGGAGCAGGAACCGGAAATACCTCAAACAAATAGTACATATGGATTACTTGTTGGTCCATTTGGTTCAACGGAAGATAGGATTTTGGAATGGAGTCCTCAGAAACGTTCCGGGACATGTAATAGGAAGACGGACTTTGCACGTCTTGTTTGGTCCAGAAGATTTATCTTGATATTCCATGAGCTTTCCATGACCGGAGCTCCACTCTCAATGTTGGAATTGGCAACAGAACTTTTGAGCTGTGGTGCGACTGTTTCAGCTATTGCACTTAGCAAGAAGGGTGGTTTGATGTCAGAGCTTTCTAGAAGACGAATCAAGGTGCTCAAGGACAAAGCAGATCTCAGCTTCAAAACTGCAATGAAGGCCGATCTTGTTATTGCTGGATCAGCTGTATGTGCATCATGGATTGAAAAATATATTGAACGTTTTCCTGCTGGTGCGAGCCAAGTTGCTTGGTGGCTCATGGAAAACCGTAGAGAGTACTTTGACCGTTCAAAGGGTGTCTTGCACAGAGTAAAGATGTTGGTTTTTCTTTCTGAATTACAATCTAAACAATGGCAAAAGTGGTGTGAAGAAGAAAACATAAAACTGCGATCACAACCTGAAATTGTTCCTTTGTCTGTTAATGATGAACTGGCATTTGTAGCCGGCATTTCTTCTACACTTAACACTCCATCCTTTAGTGCTGATAAAATGATTGAGAAAAAGCAGTTGTTGCGAGAATCAGTCCGAAAAGAAATGGGATTAACTGATAATGACATGCTTGTGATATCTCTGAGTAGCATCAACCCCGGAAAGGGACAGCTATTGCTTCTTGAATCAGCAAGCTCAGTAATAGAACACGGACTGTTGCAAGATGATAAGAAAATGAAAAAATTATCAAATATAAAGGAAAACTTGTCTACTACGACCAGAAAACGTCGTATTAGAAAATTGTTACCATTGTTGAAGGATGGCAAAGTAGCAAGCAATTCTTTAAGCAGAAGGAAACAATTGTTGGCTAATAACAAAGAAACAATGCAACAATCTCTCAAAGTTCTCATTGGTTCTGTTGGATCTAAAAGTAACAAAGGGGATTATGTTAAAAGCCTTCTGAGTTTCTTAGAACAGCATCCAAACACTTCGAAATCAGTTTTGTGGACTCCATCCACAACACAGGTTGCCTCACTATACTCTGCTGCAGATGTTTACGCCATAAACTCTCAGGGACTTGGAGAGACATTTGGACGGGTGACTATAGAAGCAATGGCATTTGGTCTTCCGGTTCTTGGAACGGATGCCGGGGGAACAAAGGAGATAGTCGAGCAAAACGTTACAGGTCTTCTTCATCCAATCGGACGTTCAGCTGGGAACGATGTCCTTGCGCAGAATCTTATGTATTTGCTTAAAAACCAGTTGGCAAGGAAGCAAATGGGGATAGAAGGCAGGAAAAAGGTGGAGAGGATGTATTTGAAGCAACACATGTATAAGAAATTTGTTGAGGTTATTGTTAGGTGCATGAGAAGCAAATAA 2136 0.4059 MIVEERKIMEESSNNRGEFQASLAKLSSLRSGGSFKSTLSGRTTPRSNSPSFRRLNTSRTPRKDGRGLGGSVLFRSNRVLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNTGVDADLSLRRDLIASDDSLSVNNETVRNKGGIGRTINVALAKKENDDVDDVPSPKVKASSKKKKKSRRSSKGKARGKKKPTVEVKINDIEEQEPEIPQTNSTYGLLVGPFGSTEDRILEWSPQKRSGTCNRKTDFARLVWSRRFILIFHELSMTGAPLSMLELATELLSCGATVSAIALSKKGGLMSELSRRRIKVLKDKADLSFKTAMKADLVIAGSAVCASWIEKYIERFPAGASQVAWWLMENRREYFDRSKGVLHRVKMLVFLSELQSKQWQKWCEEENIKLRSQPEIVPLSVNDELAFVAGISSTLNTPSFSADKMIEKKQLLRESVRKEMGLTDNDMLVISLSSINPGKGQLLLLESASSVIEHGLLQDDKKMKKLSNIKENLSTTTRKRRIRKLLPLLKDGKVASNSLSRRKQLLANNKETMQQSLKVLIGSVGSKSNKGDYVKSLLSFLEQHPNTSKSVLWTPSTTQVASLYSAADVYAINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTKEIVEQNVTGLLHPIGRSAGNDVLAQNLMYLLKNQLARKQMGIEGRKKVERMYLKQHMYKKFVEVIVRCMRSK 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04779 711 MobiDBLite consensus disorder prediction 177 194 - -
Trre11g04779 711 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 268 704 - -
Trre11g04779 711 Pfam Glycosyl transferases group 1 540 685 IPR001296 GO:0016757
Trre11g04779 711 PANTHER BNAA05G14870D PROTEIN 9 711 - -
Trre11g04779 711 MobiDBLite consensus disorder prediction 31 56 - -
Trre11g04779 711 MobiDBLite consensus disorder prediction 31 67 - -
Trre11g04779 711 MobiDBLite consensus disorder prediction 165 201 - -
Trre11g04779 711 CDD GT4_PimA-like 264 704 - -
Trre11g04779 711 Pfam Glycosyl-transferase family 4 259 428 IPR041693 -
Trre11g04779 711 Gene3D Glycogen Phosphorylase B; 435 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04779 Trre-Chr11 59064214 59067931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04779 33 709 Glycosyltransferase AT3G15940 61.328 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04779 - - mtr:25487935 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04779 11 59064214 59067931 Trre11g04779 11 59064214 59067931 ECH
Trre11g04779 11 59064214 59067931 Trre7g00281 7 1891899 1895246 PCT