Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00254 ATGGCGAAGGGAGGACAATGCTTGTTCGAGAAGGTTCGGAGGTGTATTCGGACGATTTTCTTTGTTGTTGCATTGGTTGTTTCGCTTATTGTTACGTCGCTTCCGGTGGTTGTTGCGGTGGTGGATATTCTTGTTCCGTTTGTTTTGATCTCAAATTTTACTTGTGTTAAATGCTATAGTTTCAAAGAGCATTTTCACCGTTACTCTTTCAAGAGTTCTTTGATGGATATTCCTCTTGTTTCAGCCTTAAGATCCTTCATCATTATCTGTGTTTATTCAATTTGTGATGGCCCTGCTCTTTCACACGGTCCTTACCTTGGAACTGTGACTCTGTGTTCCTTTTCCTCAATTGTTCTTCTTTCAGTCAAAGCTTGTGTTTTCACTGTCAATTCACAGATTGAAGCTGAAGCTTCAGTAGCTTCTCTAAAAAGACAGAGACTCCATTTGAAGAAGTCATGGGGAATGCCTGTGTTGTTTCTTTCGTCAGTTGTGTTTGCTCTTGGCCATACTGTTGTTGCTTATAGAACCAGCTGCAGAGCACGGAGGAAGCTCTTGTTTCATCGTGTTGACCCTGAATCTGTCCTCTCATGCAAAAGTGTTTTCTCTGGCTATCCAAAGGTCCCTCGTTCTCCTACTCCTTCTGGGGGTAGAACCCCAAAAAGTGACAGTGAAATGAGGCGAAGACCTTTTGGGACATCTCGTGATGAAGAATTACAGGCCAGATTACTTGCAGATTCAGACAGCTTTTTCATTACATGCCAAGGACTTTCTCTTCATTACAAGCTCAGCTTACCTGGTTCACCACCTCCACATACTTTATCATCAACATCTTGTATCGAATCAAATTCTAGTTACAGCATTTCATCAGTGGCTGGAGGGTTGGAGAAGTTGGAGAAGTTGGATGGACATCGGTTAGATATATCTCCGAAGATAGAGCCACATCTATACAGGAGCTATAGCAATCATATCAGAGGATCATCTCTTTATGCCCCTCTATTAGATAGTAATGCAAATTCTGTTTTTTCTGAAGATATCCCTATTTTTCATCTAGATGGTATTTCTGAAGAAAATGGAACTAGAAAATTGGATTCTTTACCCCTGGAGCAAAGTATTGGCCAATTAGGTGTTGTATTCATACATGGGTTTGGTGGAGGAGTTTTCTCCTGGAGGCATGTGATGGGGTCTCTAGCTCGGGAGACTAATTGTGCAGTTGCTGCCTTTGATCGGCCTGGTTGGGGACTAAGTTCAAGGCCGCGTCGGGAGGACTGGGATGCAAAGGAATTGCCTAATCCTTATAAGCTTGATAGTCAGATTGACCTGCTTTTATCATTCTGTTCTGAGATTGGATTTTCGTCAGTGGTGTTAATCGGTCATGATGATGGTGGATTGCTTGCTCTTATGGCTGCACAAAGAGTTCAAACATCAATGAGTTTTCATAATGTTACTATAAAAGGAGTTGTATTGCTAAATGTTAGCTTATCAAGGGAAGTTGTTCCTTCCTTTGCAAGAATCCTCCTGCATACCTCACTTGGAAAGAAGCATATGGTTCGACCTCTACTAAGGATGGAAATCACTCAAGTGGTGAATCGGCGTGCTTGGTATGACGCTACCAAATTGAGTACAGAGGTCTTGGATCTCTATAAGGCTCCACTATCTGTTCAAGGATGGGATGAAGCTGTTCACGAGATTGGTAAATTGTCATCTGAAACCATACTTTCCGCAAAAAATGCAGAATCGTTGCTACAAGCTGTAGAAGACATCCCAGTGTTAGTTATTGCAGGTGCTGAAGATTCCCTTGTCTCCTTAAAATCTTGTCAAGCTATGGCCTCAAAACTTGAAAATTCTAGACTGGTTGCAATATCTGGATGCGGCCATTTACCCCATGAAGAGTGTCCAAAGGCATTGCTTGCAGCTATATCACCTTTCATTAGTAGACTGCTGTCTGCATCTGACTCACAAAGCTGA 1965 0.4219 MAKGGQCLFEKVRRCIRTIFFVVALVVSLIVTSLPVVVAVVDILVPFVLISNFTCVKCYSFKEHFHRYSFKSSLMDIPLVSALRSFIIICVYSICDGPALSHGPYLGTVTLCSFSSIVLLSVKACVFTVNSQIEAEASVASLKRQRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLLFHRVDPESVLSCKSVFSGYPKVPRSPTPSGGRTPKSDSEMRRRPFGTSRDEELQARLLADSDSFFITCQGLSLHYKLSLPGSPPPHTLSSTSCIESNSSYSISSVAGGLEKLEKLDGHRLDISPKIEPHLYRSYSNHIRGSSLYAPLLDSNANSVFSEDIPIFHLDGISEENGTRKLDSLPLEQSIGQLGVVFIHGFGGGVFSWRHVMGSLARETNCAVAAFDRPGWGLSSRPRREDWDAKELPNPYKLDSQIDLLLSFCSEIGFSSVVLIGHDDGGLLALMAAQRVQTSMSFHNVTIKGVVLLNVSLSREVVPSFARILLHTSLGKKHMVRPLLRMEITQVVNRRAWYDATKLSTEVLDLYKAPLSVQGWDEAVHEIGKLSSETILSAKNAESLLQAVEDIPVLVIAGAEDSLVSLKSCQAMASKLENSRLVAISGCGHLPHEECPKALLAAISPFISRLLSASDSQS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00254 654 PANTHER HYDROLASE 154 650 - -
Trre7g00254 654 MobiDBLite consensus disorder prediction 206 233 - -
Trre7g00254 654 SUPERFAMILY alpha/beta-Hydrolases 376 645 IPR029058 -
Trre7g00254 654 PRINTS Epoxide hydrolase signature 380 398 IPR000639 GO:0003824
Trre7g00254 654 PRINTS Epoxide hydrolase signature 620 642 IPR000639 GO:0003824
Trre7g00254 654 PRINTS Epoxide hydrolase signature 455 468 IPR000639 GO:0003824
Trre7g00254 654 PRINTS Epoxide hydrolase signature 587 603 IPR000639 GO:0003824
Trre7g00254 654 Gene3D alpha/beta hydrolase 369 647 IPR029058 -
Trre7g00254 654 Pfam Alpha/beta hydrolase family 376 637 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00254 Trre-Chr7 1692633 1696876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00254 5 651 Miscellaneous Gene Families AT1G80280 63.969 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00254 - - gmx:100817742 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00254 7 1692633 1696876 Trre7g00254 7 1692633 1696876 ECH
Trre11g04811 11 59277307 59281216 Trre7g00254 7 1692633 1696876 PCT