Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04811 ATGGCGAGAGGAGGACATTGTTTCGAGAAGCTTCGGAGGTGTATTCGGACGGTTTTTTTCGTAGCGGCATTGGTTGCGTCGCTGTTAGTGACGTCGTTACCGGTGGTTGTGGCAGTTATTGATGTGATTGTGCCTTGTGTTTTGATTTCGAGGTTCACGTGTGTTAGTTGTTATGGTTTCAAGGAGCATTTGAGTCGTTACTCTTTTAAGAGTTCATTGACGGATATTCCTCTTGTTTCGATTATAAGATCCTTCATCATTATATGTGTTTATTCAATTTGTGACGGTCCTGCTCTCTCACATGGTCCTTACCTTGGAACAGTGGCTCTGTGTTCCTTTGTTTCGATTGCTGTGCTTTCAGTCAAAGCTTGTGTTTTCACTGTTAATTCTCAGATTGAAGGGGAAGCTTCGGTTTCCCTTGCGAGGAAGATACTCCATTTGAAAAAGTCATGGGGAATGCCTGTCTTATTTCTCTCGTCAGTTGTGTTTGCCCTCGGCCATATTGTGGTTGCTTATAGAACCAGCTGCAGAGCAAGGAGAAAGCTTCTGTTTCACCGAGTTGACCCTGAAGCGCTCCTTTCATGCAAAAGTGTTTTCTCAAGCTATCAGAAAGCCCCGCGCTCCCCTGTTCCTTCTGGCGGGCGAACCCCAAAAAGTGACACTGAAATGAAGCGGAGACCCTTTGGAGCTGCTCGTGATGAAGAAGTGCCAGTTAGATTACTTGCAGACTCTGACAGCTTATTCATCACCTGCCAAGGTCTTACTCTCCATTACAAACTAAGCCTGCCTGGGTCACCTCCTTCACTTAGCTTGTCCTCATCATCCTTTGTTGAATCTAGTTCTGTTTGCTACACTTCATCAATGTCCGGGGGACTATCAAAATTTAATAGACAACTGCCATATGTGTCTTCGAAAATCCAGCGACAACTCTACAGGACATATAGCAATCAATTCCACGATTCCTCTTCTTTATATGCTCCTCTTTTAGATGGTCCAATAACGTCTCCCTTTCCTTCCGAAGATATCCCTGTTTTTCATCTAGATGAAATTTGTGAAGATGATGAAACAGTTAAATCGAATATCCTATCTTTGGATAAAAAAGTGGAGGGCACTGGCCAAGTGGGTATTGTTTTAATACATGGGTTTGGTGGAGGAGTCTTCTCTTGGCGGCACATAATGAATTCTCTCGCTCGGCAGAGTAACTGCACAGTTGCTGCATTTGATAGGCCTGGTTGGGGATTGACTTCAAGGTTGCGACGGGAGGACTGGGAGAAAACAGAACTGCCTAATCCTTATAAACTTGAAAGTCAGGTTGACCTACTCTTGTCTTTCTGTTCGGAGATTGGATTTTCTTCAGTTGTGCTAATTGGTCATGATGATGGAGGGTTGCTTGCTTTGTTGGCCGCACAAAGAGTTCAAAGGTCAATGAATTCTTTCAACGTTACAGTGAAAGGGGTTGTATTGGTAAATGTTAGCTTGTCTCGGGAAGTAGTTCCTTCCTTTGCCAGAATCCTGCTGCACACCTCACTTGGAAAGAAGCATTTGGTTCGGCCGCTACTAAGAACAGAAATCACTCAAGTGATCAATCGGCGTTCATGGTATGATGCTACCAAACTGACCCAGGAAGTTTTGAGTCTCTATAAGGCTCCACTATACGTTGAAGGATGGGATGAAGCAGTTCATGAAATTGGTAAACTGTCATCTGAAAACATCCTGTCTGCAAAAAATGCAGAATCATTATTACAAGATGTAAAAGAGATTTCGTTGTTGGTCGTAGCCGGTGTTGAAGATTCACTAGTTTCTCTGAAATCTAGTCAAGTGATGGCATCAAAATTTGTGAATTCTAGACTGGTTGCAATCTCAGGATGTGGTCATCTACCTCATGAAGAATGTCCAAAAGCGTTGCTAGAAGCAGTATTACCCTTCATCGGTAAACTATGCTCTGTATATAACTCGCAAAGTCAGTAG 1968 0.4334 MARGGHCFEKLRRCIRTVFFVAALVASLLVTSLPVVVAVIDVIVPCVLISRFTCVSCYGFKEHLSRYSFKSSLTDIPLVSIIRSFIIICVYSICDGPALSHGPYLGTVALCSFVSIAVLSVKACVFTVNSQIEGEASVSLARKILHLKKSWGMPVLFLSSVVFALGHIVVAYRTSCRARRKLLFHRVDPEALLSCKSVFSSYQKAPRSPVPSGGRTPKSDTEMKRRPFGAARDEEVPVRLLADSDSLFITCQGLTLHYKLSLPGSPPSLSLSSSSFVESSSVCYTSSMSGGLSKFNRQLPYVSSKIQRQLYRTYSNQFHDSSSLYAPLLDGPITSPFPSEDIPVFHLDEICEDDETVKSNILSLDKKVEGTGQVGIVLIHGFGGGVFSWRHIMNSLARQSNCTVAAFDRPGWGLTSRLRREDWEKTELPNPYKLESQVDLLLSFCSEIGFSSVVLIGHDDGGLLALLAAQRVQRSMNSFNVTVKGVVLVNVSLSREVVPSFARILLHTSLGKKHLVRPLLRTEITQVINRRSWYDATKLTQEVLSLYKAPLYVEGWDEAVHEIGKLSSENILSAKNAESLLQDVKEISLLVVAGVEDSLVSLKSSQVMASKFVNSRLVAISGCGHLPHEECPKALLEAVLPFIGKLCSVYNSQSQ 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04811 655 PANTHER HYDROLASE 152 646 - -
Trre11g04811 655 MobiDBLite consensus disorder prediction 203 228 - -
Trre11g04811 655 PRINTS Epoxide hydrolase signature 455 468 IPR000639 GO:0003824
Trre11g04811 655 PRINTS Epoxide hydrolase signature 620 642 IPR000639 GO:0003824
Trre11g04811 655 PRINTS Epoxide hydrolase signature 380 398 IPR000639 GO:0003824
Trre11g04811 655 Pfam Alpha/beta hydrolase family 376 637 IPR000073 -
Trre11g04811 655 Gene3D alpha/beta hydrolase 356 647 IPR029058 -
Trre11g04811 655 SUPERFAMILY alpha/beta-Hydrolases 368 645 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04811 Trre-Chr11 59277307 59281216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04811 1 646 Miscellaneous Gene Families AT1G80280 64.363 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04811 - - gmx:100775895 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04811 11 59277307 59281216 Trre11g04811 11 59277307 59281216 ECH
Trre11g04811 11 59277307 59281216 Trre7g00254 7 1692633 1696876 PCT