Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00222 ATGGAAGCAATCACCGAAGGAGTTAACAACATCAACATCTCTGATTCTATCAAGAAGAATCGCATTCAAGTCTCCAACACCAAAAAACCTCTCTTCTTTTACGTTAATCTCGCTAAGAGGTATATGCAACAGCATAATGAGGTTGAGCTTTCAGCACTTGGAATGGCTATTGCCACTGTGGTTACTGTTGCTGAAATTTTGAAAAACAACGGTCTTGCTGTTGAAAAGAAAATCATGACATCAACAGTTGACATTAAAGATGATTCCAGAGGTAGACCTGTCCAAAAGGCCAAGATTGAAATATTACTTGGGAAGACAGCAAACTTCGACGAGTTGATGGCTGCTGCCGCGGCAGCTGCTGAAAATGGTGAAAATGGAGATGCTGAAGAGCACACTGCATGA 402 0.4154 MEAITEGVNNINISDSIKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDELMAAAAAAAENGENGDAEEHTA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00222 133 Gene3D - 18 129 IPR036882 GO:0003676
Trre7g00222 133 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 122 IPR014560 -
Trre7g00222 133 SUPERFAMILY AlbA-like 19 114 IPR036882 GO:0003676
Trre7g00222 133 Pfam Alba 20 75 IPR002775 GO:0003676
Trre7g00222 133 PIRSF UCP030333_Alba 1 133 IPR014560 -
Trre7g00222 133 FunFam Uncharacterized protein At2g34160 18 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00222 Trre-Chr7 1546878 1549176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00222 - - gmx:100305539 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00222 7 1546878 1549176 Trre7g00222 7 1546878 1549176 ECH
Trre11g04853 11 59562777 59564183 Trre7g00222 7 1546878 1549176 PCT