Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04853 ATGGAAGCCATAACAGAGGGAGTTAACAACATCAACATTAATAATAATAATAACTCCAACTCCGATTCCTATAAGAAGAATCGCATTCAAGTTTCTAACACTAAGAAACCCCTCTTCTTCTATGTTAATCTCGCCAAGAGATACATGCAACAGCATAATGAGGTCGAACTCTCAGCACTTGGAATGGCTATTGCCACAGTGGTAACTGTTGCTGAAATTTTGAAAAATAACGGGCTTGCCATTGAAAAGAAAATCATGACATCAACCGTGGACATAAAGGATGATTCTAGAGGTAGACCAGTCCAAAAGGCCAAGATTGAAATAGTACTTGGGAAGACAGCAAATTTCGATGAGCTGATGGCAGCTGCAGCGGCCGAAGATGGCGAAAATGGAGATGTTGACGAACAGACTGCGTGA 417 0.4125 MEAITEGVNNININNNNNSNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTANFDELMAAAAAEDGENGDVDEQTA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04853 138 Pfam Alba 27 85 IPR002775 GO:0003676
Trre11g04853 138 MobiDBLite consensus disorder prediction 7 24 - -
Trre11g04853 138 PIRSF UCP030333_Alba 1 138 IPR014560 -
Trre11g04853 138 SUPERFAMILY AlbA-like 26 121 IPR036882 GO:0003676
Trre11g04853 138 Gene3D - 25 136 IPR036882 GO:0003676
Trre11g04853 138 FunFam Uncharacterized protein At2g34160 25 137 - -
Trre11g04853 138 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 129 IPR014560 -
Trre11g04853 138 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04853 Trre-Chr11 59562777 59564183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04853 - - gmx:100527472 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04853 11 59562777 59564183 Trre11g04853 11 59562777 59564183 ECH
Trre11g04853 11 59562777 59564183 Trre7g00222 7 1546878 1549176 PCT