Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00204 ATGGATGAATTAGTTGTTCAAGATGAGTATGTATACAAAGAAGAAACTCTCTTAACAGTTCTAAAAACATCAAGGTTTTTCAGTGGTGATGGTTTTGTTGTGTATGATTGTATGGGACAACTTGTTTTCCGGTTTGACTCATATGGACCAATCACTCGTGATAAGGAAGAACTTGTTCTTATGAATACACATGGTCGTTCTCTTCTCACCTTACGCAAAAAGAAACCAAGTCTTCATCAAAGATGGGAAGGGTTCAAAGGAGAGAGAAAAGACGGTGATAAACCAATCTTCAATGTAAGAAGATCATCAATAATCGCACGGTCAAGAACAACCGTAACAGTGGAGGTACACGATAACCCAAATATGGAGTACCTCATCGAAGGGTGTTTCCCACAAAGATGCTGTAAGATTTTTAACGCTACAAAGAAATTAGTGGCTGAGATTCGTCGTAAGGTGGACCCCACCACTAGTGTCATGCTTGGAAAAGAAGTGTTCATGCTTTGTGTTCAACCTGATTTTGATGTGTCCTTTGCCATGGGATTAGTCTTAGTACTTGATCAGATCAATGGTGAGAATTTCTTTGATAATGGGACCACTGAGACCTCGGTGCACCCTACTACAGAAGATTGA 630 0.3984 MDELVVQDEYVYKEETLLTVLKTSRFFSGDGFVVYDCMGQLVFRFDSYGPITRDKEELVLMNTHGRSLLTLRKKKPSLHQRWEGFKGERKDGDKPIFNVRRSSIIARSRTTVTVEVHDNPNMEYLIEGCFPQRCCKIFNATKKLVAEIRRKVDPTTSVMLGKEVFMLCVQPDFDVSFAMGLVLVLDQINGENFFDNGTTETSVHPTTED 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00204 209 Gene3D - 3 192 IPR038595 -
Trre7g00204 209 Pfam LURP-one-related 5 184 IPR007612 -
Trre7g00204 209 PANTHER - 17 189 IPR007612 -
Trre7g00204 209 SUPERFAMILY Tubby C-terminal domain-like 4 189 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00204 Trre-Chr7 1415022 1417512 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00204 - - gmx:100789078 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00204 7 1415022 1417512 Trre7g00204 7 1415022 1417512 ECH
Trre11g04885 11 59762125 59764617 Trre7g00204 7 1415022 1417512 PCT