Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04885 ATGAAAGAGGGGATAGTTGTGCAACATGGTAATTACGTTTTCAAAGAAGAGATTCATTACACAGTTCTTAAAACCTCTCTATTCTTCTCCGGTGATGGTTTCACCGTCTATGATTGTCATGGTCAAGTCGTCTTCCGAGTTGACTCATATGGACCCGATTCTCGTGGCGTAGATGAACTTATTCTCATGAATCCCGAAGGCCGTTGCCTCCTCACCGTTCGCCGGAAGAGACCGAGTCTGCATCAACGGTGGGAAGGCTTTAAAGGTGAAAGAATAGATGGTGATAAACCGACCTTTAGCGTAAAGAGATCAATGATGATCGGACGGCCACGTGCAGGAGTGACAGTGGAGGTATATGATAACCAAGGTGAGGAGTACCAAATTGAAGGGTGTTTCTCTCAGCGTTGTTGCACGGTTTTTAACGCGACGAGGAAAACAATGGCTGAGATTTATCGCAAAGTGGACCCCACAACAAGTAATTTGCTTGGGAAGGAAGTGTTCTCTCTTTGCGTTAAGCCTGGTTTTGATGCTGCTTTTGCAATGGCATTCGTGCTAGTACTTGATCACATCAGCGGTGATGATTCACTTGATGATGATGATGCAACTGCGGAATCTACGGTACACCCTACTACAGAAGATTAA 642 0.4517 MKEGIVVQHGNYVFKEEIHYTVLKTSLFFSGDGFTVYDCHGQVVFRVDSYGPDSRGVDELILMNPEGRCLLTVRRKRPSLHQRWEGFKGERIDGDKPTFSVKRSMMIGRPRAGVTVEVYDNQGEEYQIEGCFSQRCCTVFNATRKTMAEIYRKVDPTTSNLLGKEVFSLCVKPGFDAAFAMAFVLVLDHISGDDSLDDDDATAESTVHPTTED 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04885 213 Gene3D - 4 196 IPR038595 -
Trre11g04885 213 Pfam LURP-one-related 9 186 IPR007612 -
Trre11g04885 213 PANTHER - 19 191 IPR007612 -
Trre11g04885 213 SUPERFAMILY Tubby C-terminal domain-like 7 190 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04885 Trre-Chr11 59762125 59764617 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04885 - - tpra:123899781 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04885 11 59762125 59764617 Trre11g04885 11 59762125 59764617 ECH
Trre11g04885 11 59762125 59764617 Trre7g00204 7 1415022 1417512 PCT