Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00202 ATGAATCGCCTCCTCTCATTTCTCTTTCATCAGGGAGTGTTGGATGAGCAATTCTTGCAGCTCCAGCAGCTACAAGATGAAACCGCACCAAACTTTGTCTCTGAGGTTGTCAACATATATTTTCACGAATCCGAGAAGCTTCTACGGAATCTAAGAGCATTGCTGATGGAGAGGGAATTTATGGACTATAAGAAAATAGGGATTGATTTGAATCAGTTTATGGGAAGTAGTTCAAGCATTGGTGCAAAGAGAGTCACTAATGTTTGTGTTGCCTTTCGTGTCGCTACTCAGCAGAACAACCGTGCCGGATGCTTCAGAGCATTGGAAATGCTGGAACATGAATACTGCTATCTCAAGAACAAATTGCACGAACTATTTCAAATTGAACAGCAACGTGCTTTGGCAGCTGGAGTGAGGCATCCAGTGCAGAATTAA 435 0.4276 MNRLLSFLFHQGVLDEQFLQLQQLQDETAPNFVSEVVNIYFHESEKLLRNLRALLMEREFMDYKKIGIDLNQFMGSSSSIGAKRVTNVCVAFRVATQQNNRAGCFRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRHPVQN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00202 144 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 131 IPR036641 GO:0000160
Trre7g00202 144 FunFam Histidine-containing phosphotransfer protein 1 1 141 - -
Trre7g00202 144 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 1 131 IPR045871 GO:0000160|GO:0009927|GO:0043424
Trre7g00202 144 Gene3D HPT domain 1 143 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00202 Trre-Chr7 1399643 1402887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00202 K14490 - gmx:100789608 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00202 7 1399643 1402887 Trre7g00202 7 1399643 1402887 ECH
Trre11g04887 11 59782285 59783324 Trre7g00202 7 1399643 1402887 PCT