Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00185 ATGTCTGCTGCTGTGTGCGGAAGTAAGAGATCTTTCTTTGAAGAACTTCCTCCTTCTCCGCCACTTTCTAAGAGGCTTCGTTGTTCTTCTGCTACTTCTCCGATTCGTTTTCCGACTCCATCTCTCATTGATCAACTCAGAAATCTCTTCCCTCATATGGACCAATTGGTTCTTGAGAGAGCTCTCCAGGAATGTGACAATGACCTAGATGCTGCCATCAAGAGCCTGAATGAGCTTTACTTGGGAGCTGCTGGTGGAAATTTTGGAACTGCTGAAGAACCGGAGATTGATGTTAATGTGGATGCAGGTATGGTTGGCATTGGCGAGTTAATGTCTGGTAAATTGCAAAATGATGGCAATGCTTCTGCTTCTGAGAACCAATCTACTTTGAACAGCCTTCCTGCAGATGGGGCAGAATGGATTGACTTTTTTGTTCGAGAAATGATGGTTGCTACCAGTGTTGATGATGCTAGGGCCCGTGCTGCTAGAATGCTGGAGGTTCTAGAGAAATCAATCAATGAGCGAGCAAGTGCTGAGACAACAGATGCTCTTCAGAAGGAAAATTCAATGCTGAAGGGGCAAATCGAAGTGCTGAGTAAGGAGAGAAATTCTTTCAAAAACGCATTTAGGATCCAACATGAACGTCTTGCTGATTATGAGAATAAGAATCAAGAATTGCAGCATTTGAAGCAGTTGGCCTCTCAATACCAGGAGCAGATCAGAACTCTTGAGATCAACAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGGGCAACGGATTTCAAGGGCATTTCCCACCTGATATCTTCTAA 819 0.4408 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSATSPIRFPTPSLIDQLRNLFPHMDQLVLERALQECDNDLDAAIKSLNELYLGAAGGNFGTAEEPEIDVNVDAGMVGIGELMSGKLQNDGNASASENQSTLNSLPADGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSINERASAETTDALQKENSMLKGQIEVLSKERNSFKNAFRIQHERLADYENKNQELQHLKQLASQYQEQIRTLEINNYALAMHLKQAQQGNGFQGHFPPDIF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00185 272 CDD CUE 41 76 - -
Trre7g00185 272 SUPERFAMILY UBA-like 40 83 IPR009060 GO:0005515
Trre7g00185 272 Coils Coil 219 246 - -
Trre7g00185 272 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 272 - -
Trre7g00185 272 Pfam CUE domain 40 78 IPR003892 GO:0043130
Trre7g00185 272 Coils Coil 154 174 - -
Trre7g00185 272 Coils Coil 181 201 - -
Trre7g00185 272 Gene3D - 38 81 - -
Trre7g00185 272 ProSiteProfiles CUE domain profile. 38 81 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00185 Trre-Chr7 1318289 1323233 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00185 - - gmx:100813137 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00185 7 1318289 1323233 Trre7g00185 7 1318289 1323233 ECH
Trre11g04894 11 59830802 59833001 Trre7g00185 7 1318289 1323233 PCT