Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04894 ATGTCTGCTGCGGTGTGCGGAACCAAGAGATCTTTCTTCGAAGACCTTCCTCCATCACCACCTGTTTCTAAGAGGCTTCGTTGTTCTTCTTCTCCAATTCGTCTTTCTCTTCCATCTCTAATCGATCATCTTCAATCTCTTTTTCCACATATGGAAGATCAGATCATTGAAAGAGCGTTGCAGGAATGTGGCAATGATTTAGATGCTGCTATTAAGAGTTTGCACGGGCTTTGTTTAGGATCTGCGGATGAAAATTCTGTAATTACGCCGAATCCGGATGCTGCAGTCGAAACAGGTGTATTTGAAGGTAATGGGGATGCTTCTGCTTCTGGGAATCAGGCAGCTGAAAACAATCTTCCTGCTGATGGACCTGAATGGATTGAGTTGTTTGTTAGTGAAATGTCGTGTGCTACCAGTGTTGATGATGCAAGAGCCCGTGCTGCTAAATTGCTTGAGGTTTTGGAGAAATCGATCAGCGCGAATGTCAGTTCTGGGGCAATGACTGATCTTCAAAGGGAAAATTTGATGTTGAAATATCAAGTTGAAGTCTTGACCAAGGAGAGAAATTGTTTCAAAAGTGCTTTTAGAATCCAGCTTGAACGCCTTTCTGATTATGAGGATAAAGACCGAGAGTTGCAGCAGTTGAAGCAGTTGGTGTCTCAATACCAGGAACAGATCAGAACTCTTGAGGTTAACAACTATGCTTTGCGAATGCATCTGAATCAGGCACAAAAATACAACCCTTTTCCTGGGGGTTTCCCTCCTGATGCTTTCTAA 777 0.4311 MSAAVCGTKRSFFEDLPPSPPVSKRLRCSSSPIRLSLPSLIDHLQSLFPHMEDQIIERALQECGNDLDAAIKSLHGLCLGSADENSVITPNPDAAVETGVFEGNGDASASGNQAAENNLPADGPEWIELFVSEMSCATSVDDARARAAKLLEVLEKSISANVSSGAMTDLQRENLMLKYQVEVLTKERNCFKSAFRIQLERLSDYEDKDRELQQLKQLVSQYQEQIRTLEVNNYALRMHLNQAQKYNPFPGGFPPDAF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04894 258 CDD CUE 39 74 - -
Trre11g04894 258 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 258 - -
Trre11g04894 258 Pfam CUE domain 39 73 IPR003892 GO:0043130
Trre11g04894 258 Coils Coil 205 232 - -
Trre11g04894 258 Gene3D - 38 79 - -
Trre11g04894 258 SUPERFAMILY UBA-like 37 81 IPR009060 GO:0005515
Trre11g04894 258 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04894 Trre-Chr11 59830802 59833001 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04894 - - gmx:100815998 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04894 11 59830802 59833001 Trre11g04894 11 59830802 59833001 ECH
Trre11g04894 11 59830802 59833001 Trre7g00185 7 1318289 1323233 PCT