Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00170 ATGGATTGGTTTTCATGGCTTTCAAAAACAAACCTTGATCCATCTCTTGTATATGAGTATGGCCTAACTCTAGCTCACAATGAGCTAGAACAAGAAGACATGGTTTACTTCAATCATGAATTTCTCCAAAGCATGGGAATCTCCATAGCAAAACATAGGCTAGAAATTCTCAAACTTGCAAGAAAAGAAAAAGGAAAAAGACAACCACCAAGACCAATTTCAAAGATCATGGTAGCAATCAAAAAGACAAAAAAGTGCTTATCTAACTACATAATGAGGAAATTGGTTACATGTGAAGAATCAAATACAGCACTTGTTGTTGTTCCAACATCAAGAGCTAGTAGTAGTAGTAGTTATTATGGAACAAGATCATCATGGAAGAGTAGTTCTTTGGTGAAGAGGAATAAAAAGTTGAAGGTTGCTAAACAAGAGAGGCTATTGCTTACAAATGGAAGTCCTAGTCCTACAATTATGCCTGGTCTTGCTCTTGATAGTTTTTGTAGTACTCCTATGGTTTATCATTTTCATGAGGGAAAGATGAAAGGTGATGATGAAGATGGTAATGGTTATTGGTCAGCTGCTGTTGAAGATATCAGTTGTAGTAACTTGCAATGGATCAGAAGCAGAAGCACCGAGTTATACTTAGAATGA 651 0.3625 MDWFSWLSKTNLDPSLVYEYGLTLAHNELEQEDMVYFNHEFLQSMGISIAKHRLEILKLARKEKGKRQPPRPISKIMVAIKKTKKCLSNYIMRKLVTCEESNTALVVVPTSRASSSSSYYGTRSSWKSSSLVKRNKKLKVAKQERLLLTNGSPSPTIMPGLALDSFCSTPMVYHFHEGKMKGDDEDGNGYWSAAVEDISCSNLQWIRSRSTELYLE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00170 216 Gene3D - 1 68 IPR013761 -
Trre7g00170 216 CDD SAM_superfamily 2 62 - -
Trre7g00170 216 SUPERFAMILY SAM/Pointed domain 5 67 IPR013761 -
Trre7g00170 216 PANTHER OSJNBA0033G05.11 PROTEIN 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00170 Trre-Chr7 1186701 1187467 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00170 - - mtr:11434394 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00170 7 1186701 1187467 Trre7g00170 7 1186701 1187467 ECH
Trre11g04907 11 59923673 59926970 Trre7g00170 7 1186701 1187467 PCT