Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04907 ATGGATTGGTTCTCATGGCTTTCAAAAACCAACCTCGAGCCATCACTAGTATATGAATATGGCCTTATCTTTGCACAAAACGAGCTTGAAGAAGAAGACATGTTATACTTCAACCATGAGTTTCTCCAAAGCATGGGAATCTCCATAGCTAAACACAGATTAGAAATTCTCAAGCTTGCTAAAAAAGACAAGAGAAAGAGTCAACACCCAGTTGCAAAATTTGTTGCTGCAATCAAGCAGACAAAAAAGTCCTTAGCTAATTATGTTAGAACTTTGACTCATACTGAAGAATCAGCACTTGTGGTGGTGCCAACAAGGCAAGGTGATGGATTTGGAAGAAGATGGAAGAGTGCTATGATGAAGAGGAACAAAAAATTTGTGGTGGCTAAGCAAGAGAAAATGTTTCTCAAAAATGGTAATTCTTCCATGCCATCAGTAGTTGTTCCTACTTTGTCTGGTGATCTTGATGGTTTTTCTAGTCCTGTTGTGTATCATTTCCAAAAGGAGCAAAAGATGGATGGAGATGATAGTGGTGTTCATAAAGATAATGATGATGATGATAATGGATATTGGTCTGCTGCAGTTGAAGAGATTAAGTGGGATACCATCTGCAACAGACACGATGTTGCAGCTGTAGAGGATCCAATTTCCTATACATCTTCCCGTGAAGTATTGAGGAATAGTTACATTAGGTGCACGCCATCATCACAAGGCTACCTATTAACGGTGGAGGCCCGTTCCAGTCCGTCCAAGACGCCATACAATGAACATGCTTATTCAAATAAGCGCCGGATGCTACAAGTATGA 807 0.4015 MDWFSWLSKTNLEPSLVYEYGLIFAQNELEEEDMLYFNHEFLQSMGISIAKHRLEILKLAKKDKRKSQHPVAKFVAAIKQTKKSLANYVRTLTHTEESALVVVPTRQGDGFGRRWKSAMMKRNKKFVVAKQEKMFLKNGNSSMPSVVVPTLSGDLDGFSSPVVYHFQKEQKMDGDDSGVHKDNDDDDNGYWSAAVEEIKWDTICNRHDVAAVEDPISYTSSREVLRNSYIRCTPSSQGYLLTVEARSSPSKTPYNEHAYSNKRRMLQV 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04907 268 Gene3D - 1 69 IPR013761 -
Trre11g04907 268 CDD SAM_superfamily 2 62 - -
Trre11g04907 268 Pfam SAM domain (Sterile alpha motif) 19 58 IPR001660 GO:0005515
Trre11g04907 268 PANTHER OSJNBA0033G05.11 PROTEIN 1 203 - -
Trre11g04907 268 SUPERFAMILY SAM/Pointed domain 5 65 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04907 Trre-Chr11 59923673 59926970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04907 - - gmx:102660142 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04907 11 59923673 59926970 Trre11g04907 11 59923673 59926970 ECH
Trre11g04907 11 59923673 59926970 Trre7g00170 7 1186701 1187467 PCT