Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00169 ATGGATTCCAATAATTGGGCACCTAATCAGGGTACTGAACAACCCCCTGTCAACACAGATGATTGGAGAACTCAACTGCAACCTGATTCACGCCAAAGAATCGTCACCAAAATAATGGACACACTAAAAAAACATCTTCCTGTTTCCGGTTCTGACGGATTAATTGAACTTAGTAAGATTGCTCAAAGGTTTGAAGATAAGATTTATAATAATTCGACAAGCCAGTCTGATTATCTACGGAAAATATCCATGAAAATGCTTACAATGGAAAATAAATCTCAAAACACCACTGCCAACAATATGCAATCAAATGAAGGTGGTCCTAGCAATAATCCACCCGATCAAGGGCTCATTTTACAGTCTCAAGTACTTAATCAAGGGCAGCAACATCCTAATCCCTTGCCTGGTCAGCAACAGCCGCGTCAGCAGCTTCTATCTCAGACCATTCAAAATAATACTGCACCTCAACCTAACTTTCCTTCGGTATCGAATCTATCCCAGATCCCCAACCAGAATATTGGCCAAAATTCCAACACACATCAACCTGGGCAAAATTCTGCGAGTAATGCTATTGGCCAGAATTCCAATGTACAGAGTATGTTTCCTGGTTCTCAGAGACAAATGCCTGGAAGGCAGCAGCAGGTTGTTCCACAACAGCAACAGCAGCAACCACAGAATCCACAACAGATTCTTTTCCAACAGCAGCTTCTTAAGCGCAAGTTCCAACTGACGCAACAGATGCAGCAACAACCACAGCAGAACCTTCTGCAACCAAATCAGTTGCAATCTTCTCAGCAATCTGCTATGCAAACGTCATCGGCTATGCAGCCTTCTTCCATGATGCAAACATCTCTATCTTCTAGCCTTCCACAGAATCAGCAGTCTAACAATGTTCAACAGTCAACACAGTCCAGGCTTCAGCAACATTCCCAAATTATCAGGCAGCAACAGAATTCTATTGCTCATCAGCAACAAACACCAATGACTCAACAGCCAAACTTGCCTGTACAGCAGCAGCAGCTTGTAGGGGCTCAGTCAAACACAATGAATGGGCAACATGCTCAGATGCTTGGGCCACAGAGCAATGTTGATGACACACAGAAACCCCAGAGGTTACATCCACAACAGAATAATGCCATGAACATGCAACAGCGACAGCAACAACAACAGTTAATGAATCAGCAAAACAATCTAACAAATATACATCAACAGTCAGGAAATAATGTACCAGGGTTACAACAGCAACTGTTTGGAACCGAGTCTGGCAATCAAGGCATCCAAACAAGCAATCATTCTACACACATGTTGCAACAACCAAAGGTTTCAATGCAGCAACAATTGCAACAAAATGCATCGAAATTGTTGCCTTCTCAGTCACAGCAGTCCCAAACACAGGCTTCACAGCAGCAATTAATGTCGCAGATTCACAATCAGCCTGCACAGATGCAGCAGCAGCCAAATCCCCTGCAACGAGATATGCAGCAAAAACTTCAAGCATCAGGATCCTTACTTCAACAACAAAGTGTTCTTGATCAGCAAAAACAATTATATCAATCTCAAAGAGCTCTTCCAGAAACATCAACAACTTCTGTGGATTCTACCATTCAGACTGCACAACCAAGTGGAGTTGATTGGCGAGAAGAAGCTTACCAAAAGCTGCAAACCATGAGAGAAAATTACTTGCCAGATTTGAATGAAATATACCAGAAAATTTCTCTAAGACTTCAGCAGCACGAGTCTATTCCTCAACAGCCAAAGTCAGATCAGATTGAAAAGATGAGGCAATATAAAATTGTGGTGGAACGCACATTAGGAGTCCTACAGCTTTCCAAGCAAAACATTGCGCCTGGTTTTAAGGAAAAATTGGGATCATATGAAAAGCAGATAGTAAATATCATAAGTTTACTTAGGCCGAGGAGAGGCATCTCTTCACTGCAACCAGGACAGCTTCCCCAAACTCATATGCCTTCGATGCCACTGTCACAATCCCAAGTTACTCCAGTACAGTCTCGTGAAAATCAAATGAACTCTCAGATGCAGAACAATGTTTCGAGCTTGCAGCACAATTCTATGTCTGGTTTAGCAACAACACAACAAAATATGTTGAATACAATTCAACCAAGTAATAATTTAGATTCTGGACAAGGAAATTCCGTGAACTCTCTGCAACAGGTTCCAATGAGCTCCCTTCAACAAAACATTGTTAGTACTCCTCAACAGACCAACATCAATTCATTACGGTCACAAGGTGGGGTAAATGTGATCCAACCAAATCTAAATACCCACCAGTCAGGTTCCACTATGTTTCAGCACCAGCAGGAACAGAAGATGCTGCAGAATCATCAGTTGAAACAACAATATCAGCAACGACAATTGATGCAGAGGCAGCAGCAGCAGCTACATCAGCCTGCTAAGCAACAGCTGTCTGGACAACTTCAGACACATCAAATGCCTCAGATTAACCAAATGAATGATATCAATGATATGAAAATGCGACAAACAATGGGTGTTAAGCCAGGGGTATTTCAGCAACATCTTACCTCAGGTCAAAACTCAGCCTATTCCCATCAACAGTCGAAACAAGGGAGTCCATTTCAGGTTTCTTCACCCCAGCTCTTTCAGGCTGCGTCTCCTCAAATTCCACAACACTCATCTCCCCAAGTTGACCAACAAACTCATCTCCAGTCTCTAACGAAAGTTGCAACTCCTCTGCAATCTTCTAATTCACCTTTTGGGGTCCCTACTCCTTCACCTCCCATGGCTCCATCTCCTATGCTAGGAGACTCTGAGAAGCCCATTCCTGGCGTTTCATCATCAAACGCTGTCAATGTTGGACAACATACAGGGGGTGCAGCAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATATCAGCCTCTCCTTTATTGGCAGAATTCAGTGGTCCAGATGCATATGTTAATGCTTTAGCAGCTACTTCTGGGAAGTCAACTGCAGAGCAGCCTATTGATCGTCTAATCAGAGCGGTGCAATCAATGTCGACTGAAACATTAACTGCGGCTGTCAATGATATTAGTTCAGTTGTCAGCATGAGTGATATGATAGCAGGATCTGCTCCAGGTAATGGATCCAGAGCAGCTGTTGGCGAGGATTTGGTTTCCATGACTAATTGTCGTCTTCAGGCTAGAAACTTTATTACTCAAGATGGTACTAGTGGAATCAGGAAGATAAAGCGCTACACCAGTGCTAGACCGTTGAATGTTGTGTCATCTGCTGGAAGCAAGAATGATAGTATCAAGGAGTTATCTGCTTCAGAGGCTTCACAGCAGGAACCAACTGTAACATCCAATGTCAAGAAGCCAAAGGTTGAGGTTAATCACGCCCTTTTGGAAGAAATACAGCAAATTAATCAGCGACTTATCGACACTGTAGTAGACATAAGTGATGAAAATGTTGATTCAACTGCAGCTGCTGTTTCTGCCGCTGAAGTGGCAGAAGGGACCGTTGTCAAATGTTCTTTCATTCCCGTGGCTCTCAGTCCAACTTTAAAATCTCAATATGCTTCACTACAGTCACCTATTCAGCCCCTGCGTTTGCTGGTTCCTCCTAATTATCCTAATTGTTCTCCCATATTCCTAGACAAGTTTCCAGTTAAATCCCGTGAGGGGAATGAAGATCTTTCAGAGAACGCAAAATCAAAGTTTAGCACATCCTTGCGTAATTTATCACATCCTATGTCCCTTAAGGATATAGCAAAGACTTGGGATACTTCCGCTCGCGGTGTTGTTTCTGAGTATGCACAAGAATTTGGTGGAGGAACATTCAGCTCTAAGTATGGAGCTTGGGAATATGGAACTTGGGAGGATATCTTGGCTGCATAA 3864 0.4309 MDSNNWAPNQGTEQPPVNTDDWRTQLQPDSRQRIVTKIMDTLKKHLPVSGSDGLIELSKIAQRFEDKIYNNSTSQSDYLRKISMKMLTMENKSQNTTANNMQSNEGGPSNNPPDQGLILQSQVLNQGQQHPNPLPGQQQPRQQLLSQTIQNNTAPQPNFPSVSNLSQIPNQNIGQNSNTHQPGQNSASNAIGQNSNVQSMFPGSQRQMPGRQQQVVPQQQQQQPQNPQQILFQQQLLKRKFQLTQQMQQQPQQNLLQPNQLQSSQQSAMQTSSAMQPSSMMQTSLSSSLPQNQQSNNVQQSTQSRLQQHSQIIRQQQNSIAHQQQTPMTQQPNLPVQQQQLVGAQSNTMNGQHAQMLGPQSNVDDTQKPQRLHPQQNNAMNMQQRQQQQQLMNQQNNLTNIHQQSGNNVPGLQQQLFGTESGNQGIQTSNHSTHMLQQPKVSMQQQLQQNASKLLPSQSQQSQTQASQQQLMSQIHNQPAQMQQQPNPLQRDMQQKLQASGSLLQQQSVLDQQKQLYQSQRALPETSTTSVDSTIQTAQPSGVDWREEAYQKLQTMRENYLPDLNEIYQKISLRLQQHESIPQQPKSDQIEKMRQYKIVVERTLGVLQLSKQNIAPGFKEKLGSYEKQIVNIISLLRPRRGISSLQPGQLPQTHMPSMPLSQSQVTPVQSRENQMNSQMQNNVSSLQHNSMSGLATTQQNMLNTIQPSNNLDSGQGNSVNSLQQVPMSSLQQNIVSTPQQTNINSLRSQGGVNVIQPNLNTHQSGSTMFQHQQEQKMLQNHQLKQQYQQRQLMQRQQQQLHQPAKQQLSGQLQTHQMPQINQMNDINDMKMRQTMGVKPGVFQQHLTSGQNSAYSHQQSKQGSPFQVSSPQLFQAASPQIPQHSSPQVDQQTHLQSLTKVATPLQSSNSPFGVPTPSPPMAPSPMLGDSEKPIPGVSSSNAVNVGQHTGGAAAPAQSLAIGTPGISASPLLAEFSGPDAYVNALAATSGKSTAEQPIDRLIRAVQSMSTETLTAAVNDISSVVSMSDMIAGSAPGNGSRAAVGEDLVSMTNCRLQARNFITQDGTSGIRKIKRYTSARPLNVVSSAGSKNDSIKELSASEASQQEPTVTSNVKKPKVEVNHALLEEIQQINQRLIDTVVDISDENVDSTAAAVSAAEVAEGTVVKCSFIPVALSPTLKSQYASLQSPIQPLRLLVPPNYPNCSPIFLDKFPVKSREGNEDLSENAKSKFSTSLRNLSHPMSLKDIAKTWDTSARGVVSEYAQEFGGGTFSSKYGAWEYGTWEDILAA 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00169 1287 SUPERFAMILY Kix domain of CBP (creb binding protein) 19 94 IPR036529 GO:0003712|GO:0006355
Trre7g00169 1287 MobiDBLite consensus disorder prediction 151 227 - -
Trre7g00169 1287 MobiDBLite consensus disorder prediction 351 372 - -
Trre7g00169 1287 Gene3D Coactivator CBP, KIX domain 21 100 IPR036529 GO:0003712|GO:0006355
Trre7g00169 1287 Pfam KIX domain 20 99 IPR036546 -
Trre7g00169 1287 MobiDBLite consensus disorder prediction 520 541 - -
Trre7g00169 1287 Coils Coil 377 404 - -
Trre7g00169 1287 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 850 1272 IPR044661 GO:0003713|GO:0031490
Trre7g00169 1287 MobiDBLite consensus disorder prediction 520 542 - -
Trre7g00169 1287 MobiDBLite consensus disorder prediction 849 868 - -
Trre7g00169 1287 MobiDBLite consensus disorder prediction 248 330 - -
Trre7g00169 1287 MobiDBLite consensus disorder prediction 438 502 - -
Trre7g00169 1287 MobiDBLite consensus disorder prediction 1093 1112 - -
Trre7g00169 1287 MobiDBLite consensus disorder prediction 904 935 - -
Trre7g00169 1287 MobiDBLite consensus disorder prediction 93 117 - -
Trre7g00169 1287 FunFam Mediator of RNA polymerase II transcription subunit 15a 21 99 - -
Trre7g00169 1287 MobiDBLite consensus disorder prediction 1 23 - -
Trre7g00169 1287 MobiDBLite consensus disorder prediction 794 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00169 Trre-Chr7 1175741 1184478 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00169 K14972 - gmx:100805336 1450.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g00106 11 860423 861870 Trre7g00169 7 1175741 1184478 PCT