Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00106 ATGTCGACGTCGTCAGATTCTATGGATTCAACTGCCCATACTCGACACCCAAGTGACTGTGATTGGCAAGAACAAGTATATCAAAAAATCAAAGCTATGAAAGAGAGCTACTTGGAAGAGCTTTGTGAGATGTATCAGAAAATCGAATCAAAACTTCAGCAGCATGATTCTCTTCCCCACCAACTGACGTCGGATATTTTGCTTAAGCTTAAGGTATTTAAAATGATGTTGGAGCGTCTTATAACATTCCTCCAGGTTCCCAGGAGCAACATCTCTCCTATTGTAAAGGAGAAACTGGATTCATATGAGAAGCAGATTATAAATTTCATAAATACAAATAGACCTTGGAAAATGTCTTCACTGCAACCGGGGCAGCTTCCCCCACCTCACATGCACTCCATGTCACAGACGCAGTCCCAAGTTACTCAAGTGCAATCCCATGAAAATCAAATGAATAATCAATTGCAAACAATGCAGCAGAATAATATGACAAGCTTGCAGCATAGCTCTCTGTCAGGTGTATCGACAGCACAACAGAATAATCAATGA 549 0.4062 MSTSSDSMDSTAHTRHPSDCDWQEQVYQKIKAMKESYLEELCEMYQKIESKLQQHDSLPHQLTSDILLKLKVFKMMLERLITFLQVPRSNISPIVKEKLDSYEKQIINFINTNRPWKMSSLQPGQLPPPHMHSMSQTQSQVTQVQSHENQMNNQLQTMQQNNMTSLQHSSLSGVSTAQQNNQ 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00106 182 MobiDBLite consensus disorder prediction 129 148 - -
Trre11g00106 182 MobiDBLite consensus disorder prediction 118 148 - -
Trre11g00106 182 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 4 177 IPR044661 GO:0003713|GO:0031490
Trre11g00106 182 Coils Coil 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00106 Trre-Chr11 860423 861870 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00106 K14972 - tpra:123899812 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g00106 11 860423 861870 Trre7g00169 7 1175741 1184478 PCT