Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05441 ATGAAAATATCTGGTCCGTTGCTGCATGTGAAGGGTAACACATACTACATCGAACTCATGAAGAGTAGCAAATTCTGCATTTGTGCAAGAGGTCATGAAGTTAATAGTCCGCGCGTGGTTGAGGCCATATTCCACGAGTCCATTCCTGCTATCATATCTCATAATTTTATTCCTTCTTTGCTTGAGGTTTTGAATTGGGATTCTTTTGCTGTGTTTATCAAGGAGGGCTATATCGGAAGAGAAATACTTGGAGATGCAGAAGAGGGTGAAAAAGGTGCAAGATCATTCTCTTTGGCATCATGA 303 0.4092 MKISGPLLHVKGNTYYIELMKSSKFCICARGHEVNSPRVVEAIFHESIPAIISHNFIPSLLEVLNWDSFAVFIKEGYIGREILGDAEEGEKGARSFSLAS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05441 100 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 10 83 IPR004263 GO:0006486|GO:0016757
Trre5g05441 100 Pfam Exostosin family 15 76 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05441 Trre-Chr5 55038336 55038638 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05441 - - psat:127085356 135.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05441 5 55038336 55038638 Trre1g00942 1 7160428 7162854 PCT