Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00942 ATGGGTGGAGATTTTGTGTCAATGTTTCAGCTAGAAACAAAGAGATTATTATGGCTTATTGGAATTACTTTTGCAATCATCTTATCTTTTCAGTATCTTGAGCTTCCATATGGCAATGTTTTACTCTCTCTATTCTCTTCTAACAAATTACCAATATCTCAAACTAAAGATACCAACAACAACACTATTGTTAACAATGTCACAATTTTCGGTCAACAAAACAGTACCGATGAATTCGCCATTGAGAAAGTTAATGCAACTAAGGATACTGTTTCAATAACTGGTTTTGTCTTGGAACCAGGATTTGATGAGTCTAACAAAAGTTCAATAGTTGATGATAGTATCAAGAGTTTAGGTAATGTAAGTAATGCACAAAAGATAGAAGAAAATGTTGTATCGACAAATTTAACTCAAGGTTTTGATTCTACGACAAATGCGAGTCCGAATATAACAAATGCAGTGTTATCAAATGATGATAACAAGTCATCATTATCTCAGAAACCTATCAGTCCTGTGCCTAAGGAGAATCATGAAACTCAGGCAACAATTCCACAAGTCACAACGGTGTCCGAAATGAAGAAGTTATTGCTTCAAAGTCATGTGTCGTATCGATCAATGAAGCCATTGTGGTTTTCAGATGTTGATCAAGAGTTACTGCAGGCAAGATCAGAGATTGAAAATGCACCAATTGTAAAGAATGATCCAGAACTCTATGGTCCTATTTATCATAATGTTTCGATGTTCAAGAGGAGCTATGAATTAATGGAAGAGAGACTCAAAGTGTATGTATATAGAGAAGGAGCTAGGCCTATATTGCATTCACCATTTCTCACAGGAATCTATGCTTCCGAGGGATGGTTTATGAAGCTAATGGAAGCTAATAAAAGATTTGTAACAAAAGATCCAAAGAAGGCTCACCTTTTTTACTTACCTTTCAGTTCTCGGATGTTAGAGGAAGCCTTGTATGTAAAGGATTCACACAGTCACAAAAACCTGATTCAATATCTACATGATTATGTAGACCTGATTGCGTCGAGACATTCTTTCTGGAACAGAACTGGAGGCGCTGATCATTTTCTTGCTGGTTGCCATGATTGGGCTCCGTCGGAAACAAAGTTGCGCTTAACTAACTGCATAAGGTCCCTTTGCAATGCCGATGTGAAAGAAGGATTTGTCTTTGGTAAAGACGCGTCTCTTCCAGAAACCTATGTCCGAAACGCTCAAAATCCAACTAGGGATCTTGGTGGCAATACATTTAAAAAGAAGACAGTACTAGCATTTTTCGCAGGGAGCATGCATGGTTATGTGAGACCAATTCTACTAAAGCATTGGGAAAATAAAGATCCTGACATGAAAATCTTCGGAAAATTGCCAAAATCGAAAGGAAACAGTAACTACATTCATTACATGAAGAGTAGCAAGTATTGTATTTGTGCAAGAGGGTATGAAGTGAATAGTCCAAGAGTTGTAGAAGCTATTTTCTATGAATGTGTTCCGGTTATTATATCTGATAATTTCGTGCCACCGTTTTTCGAGGTTTTGAATTGGGAATCCTTTGCTGTTATTGTTTTGGAGAAGGACATTCCAAATTTGAAAAATATACTACTTTCAATTCCAGAAAAGAGGTATCTAAGATTGCTTATGAGGGTCAAAAAGGTACAACAACATTTCTTGTGGCACAAGAATCCTGTCAAGTATGATATATTTCATATGATCCTTCATTCTATTTGGTATAATAGAGTTTTCTCTGTCACTAGCTAG 1761 0.3651 MGGDFVSMFQLETKRLLWLIGITFAIILSFQYLELPYGNVLLSLFSSNKLPISQTKDTNNNTIVNNVTIFGQQNSTDEFAIEKVNATKDTVSITGFVLEPGFDESNKSSIVDDSIKSLGNVSNAQKIEENVVSTNLTQGFDSTTNASPNITNAVLSNDDNKSSLSQKPISPVPKENHETQATIPQVTTVSEMKKLLLQSHVSYRSMKPLWFSDVDQELLQARSEIENAPIVKNDPELYGPIYHNVSMFKRSYELMEERLKVYVYREGARPILHSPFLTGIYASEGWFMKLMEANKRFVTKDPKKAHLFYLPFSSRMLEEALYVKDSHSHKNLIQYLHDYVDLIASRHSFWNRTGGADHFLAGCHDWAPSETKLRLTNCIRSLCNADVKEGFVFGKDASLPETYVRNAQNPTRDLGGNTFKKKTVLAFFAGSMHGYVRPILLKHWENKDPDMKIFGKLPKSKGNSNYIHYMKSSKYCICARGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLNWESFAVIVLEKDIPNLKNILLSIPEKRYLRLLMRVKKVQQHFLWHKNPVKYDIFHMILHSIWYNRVFSVTS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00942 586 MobiDBLite consensus disorder prediction 154 180 - -
Trre1g00942 586 Pfam Exostosin family 256 536 IPR040911 -
Trre1g00942 586 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 16 576 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00942 Trre-Chr1 7160428 7162854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00942 - - gmx:100526957 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05441 5 55038336 55038638 Trre1g00942 1 7160428 7162854 PCT