Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05128 ATGTTGTTTAAGTTTGTAGCAGGTCCTAGGAAGAAGAAACCAGGAACCGTTCCTGTTTATCTTAACGTATATGACCTCACACCCATTAACGGTTATGCCTATTGGCTTGGTCTTGGAGTTTATCATTCTGGAGTTCAAGTTCATGGTATTGAATATGGTTTTGGAGCACATGAAAATGACACAACAGGAATTTTTGAAGTTCAACCAAAAAACTGTCCTGGTTTCACTTTTAGAAAATCTATTTTTATTGGAACAACGGATCTGGGTGTGAAAGATGTTCGAGGATTTATGGAGAAATTAGCTCAAGAGTATTCTGGAAATTCTTATCATCTTATTTCCAAAAATTGTAACCATTTTTGTGATGATGTTTGTTATAAATTAACTGGAAAATCAATTCCTCGATGGGTTAACCGACTTGCAAGACTAGGTCTATTTTGCAATTGCGTTCTTCCCCCTGGCTTGAATGAAACAAAGGTTCGCCAAGATACATCAGAAAAGGTTGAAGAAAGAGAAAAGAGGAAAATCAGAAGTCAGTCCAGCCGGTACGAGGCTTCCTCCAATCGTCAAGCTTCATCAAGACATTGTCTTCCTCGATCATTGATGAAAGCTTCTTCAACTTCAACATTAACAGTAAAGTAA 639 0.374 MLFKFVAGPRKKKPGTVPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGIEYGFGAHENDTTGIFEVQPKNCPGFTFRKSIFIGTTDLGVKDVRGFMEKLAQEYSGNSYHLISKNCNHFCDDVCYKLTGKSIPRWVNRLARLGLFCNCVLPPGLNETKVRQDTSEKVEEREKRKIRSQSSRYEASSNRQASSRHCLPRSLMKASSTSTLTVK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05128 212 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Trre5g05128 212 MobiDBLite consensus disorder prediction 180 212 - -
Trre5g05128 212 PANTHER DESUMOYLATING ISOPEPTIDASE 16 193 IPR008580 GO:0008233
Trre5g05128 212 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Trre5g05128 212 MobiDBLite consensus disorder prediction 159 179 - -
Trre5g05128 212 MobiDBLite consensus disorder prediction 159 212 - -
Trre5g05128 212 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Trre5g05128 212 Gene3D PPPDE domains 12 174 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05128 Trre-Chr5 52599567 52601163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05128 K22763 - gmx:100306675 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00657 1 4947428 4949719 Trre5g05128 5 52599567 52601163 PCT