Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00657 ATGCTATGTAAACTTGTTCCGTTGTCGCGGAAGAAAAAATCCGGTTCGGTTCCGGTTTATCTTAACGTCTATGATCTTACCCCAATTAATGGTTATGCTTATTGGTTTGGTCTTGGAGTTTATCATTCTGGTGTTCAAGTTCATGGTGTTGAATATGGATTTGGAGCACATGACCGTGAAACTACTGGGATTTTTGAAGTGGAGCCGGGAAAATGTCCAGGATTCACTTTTAGAAAATCAATTTACATTGGATCAACGGATATGGGACCGAAGGATGTTCGGGAGTTTATGGAGAAGCTAGCTGAAGTGTATGCTGGAAATACATACCATCTTATACAAAAGAATTGCAACCATTTCTGTAATGATGTTTGTGTCAGATTAACCGGAAAGTCAATTCCTCGATGGGTTAATAGACTCGCTAGAATTGGTTTTCTCTGCAACTGTGTTCTTCCAACCAGCCTAAATGAAACAAAGGTTGGACAAGCTACATTAGACAAGATTCAGGAAGGAGAAAGTAAGAAAATGAGAAGTCAGTCCCGCAGGCACGCGGCTTCTTCCAATTCTTCATTGTCTGCTAGCCAAAGACATTGCCTTCCTCCATCTTCATGTGTAATTAATACTTCTTCATCGTCTACCTTAGCAGTAAAGTAA 651 0.4025 MLCKLVPLSRKKKSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGVEYGFGAHDRETTGIFEVEPGKCPGFTFRKSIYIGSTDMGPKDVREFMEKLAEVYAGNTYHLIQKNCNHFCNDVCVRLTGKSIPRWVNRLARIGFLCNCVLPTSLNETKVGQATLDKIQEGESKKMRSQSRRHAASSNSSLSASQRHCLPPSSCVINTSSSSTLAVK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00657 216 MobiDBLite consensus disorder prediction 169 197 - -
Trre1g00657 216 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Trre1g00657 216 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Trre1g00657 216 Gene3D PPPDE domains 12 180 IPR042266 -
Trre1g00657 216 MobiDBLite consensus disorder prediction 181 197 - -
Trre1g00657 216 PANTHER DESUMOYLATING ISOPEPTIDASE 16 193 IPR008580 GO:0008233
Trre1g00657 216 ProSiteProfiles PPPDE domain profile. 17 168 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00657 Trre-Chr1 4947428 4949719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00657 K22763 - gmx:100810627 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00657 1 4947428 4949719 Trre5g05128 5 52599567 52601163 PCT