Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04184 ATGGCTACTACGTCTTCTCTTCTACACTTTCCCGAACTCCATTTTATTTCTCCACAAATCACACTCAACCGCCGTTTATCTTTCTCTACACGCTCCATTTCCCGCCTTTCTACCTCCAATGTTACTCTTCGCGCAACGCGAATTCGTGCTGCGAAAGACGAATCCGCGTTAGCCGAGCGAGTTAACGACGTTGAGTTAACCGGTAACGGAGTTGCGTCTCGTTCCGGCATCAATGGAGCGGCAGGAGGATATGTTAACGGCGCCGTCAACGGAAGTTCGGTGGAGTACGGATATAGTAAAGGAAACAGAAACGGTGTAGCTGTTACGGAGGTTGTGGATGTTGAAGCTTCCAAGGTGAATGAGGATGGAAGGAAGAGAAGGTTAGAGGAGATTGGAAAAGAAGACGCGTGGTTTAAACAAACTGAGAAAGAAAAAGTTGAGGTAGCAGTTGCTCCTGGAGGTCGTTGGAGTAGGTTCAAGACTTACTCTACAATCCAGAGAACCTTAGAAATTTGGGGATTTGTTGTAACGTTTATATTTAAGGCTTGGCTGGACAATCAGAAATTCTCTTACAAAGGAGGAATGACTGAGGAAAAAAAGAAGTTAAGGCGGCAGACCCTTGCCAAATGGCTTAAGGAAAGCATTTTGAGATTAGGTCCTACATTCATTAAAATTGGTCAGCAGTTCTCCACTAGGGTGGACATTCTTCCTCAAGAATATGTTGACCAGTTGTCTGAACTTCAGGATCAAGTTCCTCCATTTCCCTCTGAGACTGCTTTAGCTATTGTTGAAGAAGAGCTTGGAGCTTCTGTAGGTGATATCTTTGATCAGTTTGACTATGAACCAATAGCTGCTGCAAGTCTTGGTCAGGTTCATCGTGCAAGATTGAAGGGACAGGAGGTTGTTATTAAAGTGCAAAGGCCCGGTCTCAAGGATCTTTTTGATATTGATCTAAAAAACCTGAGGGTTATTGCTGAATATCTTCAAAAAATTGATCCAAAGTCAGATGGTGCAAAGAGGGATTGGGTTGCTATTTATGATGAATGTGCCTCTGTCTTATATCAGGAGATCGATTACACTAAGGAGGCTGCTAATGCAGAATTGTTTGCAAGTAACTTTAAGAACATGAGTTATGTGAAAGTTCCTACAATCTACTGGGATTATACCACACCACAGATTCTGACAATGGAATATGTTCCAGGAATTAAAATAAACAAAATACAAGCTTTAGATCAACTTGGTGTTGATCGCAAAAGGTTAGGGAGATATGCAGTTGAGTCGTTCTTGGAACAAATTCTATCACATGGTTTCTTCCATGCTGACCCTCATCCTGGAAATATTGCAGTTGACGATGTCAATGGTGGAAGATTGATCTTCTATGATTTTGGAATGATGGGGAGTATCAGTCCAAACATCCGAGAAGGCTTACTCGAAACATTTTATGGAGTCTATGAAAAAGATCCAGATAAGGTTCTTCAATCAATGATTCAAATGGGTGTTCTTGTCCCTACTGGAGATATGACTGCCGTTAGGCGAACAGCACAATTCTTTCTTAACAGTTTTGAGGAGCGCCTAGCAGCACAAAGGAGAGAGAAAGAGGAAGCAACAGGCGAACTTGGATTCAAAAAACCATTAAGCAAGGAGGAAAAACTAATGAAGAAGAAACAACGTCTAGCTGCTATTGGTGAAGATTTATTATCCATTTCATCAGACCAACCCTTCCGATTTCCTGCTACATTTACATTTGTTGTTAGAGCCTTCTCAGTGTTGGATGGCATTGGAAAGGGACTTGACCCACGTTTTGACATTACTGAGATTGCCAAACCTTATGCTCTGGAGTTACTAAGGTTTCGTGAGGCAGGGGTTGAAGTTGTCTTAAAGGACTTCACTAAGAGATGGGACAGACAATCTCAAGCATTTTACAACTTATTTAGGCAGGCTGACAGGGTTGACAGGCTTGCTACAATTATCCAAAGACTGGAGCAAGGAGATCTAAAGCTCCGAGTTCGGACTTTAGAATCTGAAAGGGCATTCCAGCGTGTTGCCACAGTCCAGAAGACTATAGGGAATGCAGTAGCTGCTGGAAGCCTAATAAATCTTGCGACAGTTTTGTACCTCAATTCGATTCGTGCGCCTGCAATTGCAGCATATGCCTTCTGTGCATTCTTTGGTTTCCAAGTGCTCTTGGGCATTGTAAAGGTCAAGAAGCTAGATGAAACGGAACGATTGATAACAGGAACTGCATAA 2247 0.425 MATTSSLLHFPELHFISPQITLNRRLSFSTRSISRLSTSNVTLRATRIRAAKDESALAERVNDVELTGNGVASRSGINGAAGGYVNGAVNGSSVEYGYSKGNRNGVAVTEVVDVEASKVNEDGRKRRLEEIGKEDAWFKQTEKEKVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVVTFIFKAWLDNQKFSYKGGMTEEKKKLRRQTLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETALAIVEEELGASVGDIFDQFDYEPIAAASLGQVHRARLKGQEVVIKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKNMSYVKVPTIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRKRLGRYAVESFLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDPDKVLQSMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREKEEATGELGFKKPLSKEEKLMKKKQRLAAIGEDLLSISSDQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVVLKDFTKRWDRQSQAFYNLFRQADRVDRLATIIQRLEQGDLKLRVRTLESERAFQRVATVQKTIGNAVAAGSLINLATVLYLNSIRAPAIAAYAFCAFFGFQVLLGIVKVKKLDETERLITGTA 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04184 748 SUPERFAMILY Protein kinase-like (PK-like) 248 490 IPR011009 -
Trre5g04184 748 Coils Coil 518 538 - -
Trre5g04184 748 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 123 711 - -
Trre5g04184 748 CDD ABC1_ADCK3-like 247 495 - -
Trre5g04184 748 Pfam ABC1 atypical kinase-like domain 246 494 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04184 Trre-Chr5 43588393 43599715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04184 - - gmx:100791330 1268.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04184 5 43588393 43599715 Trre5g04184 5 43588393 43599715 ECH
Trre5g04184 5 43588393 43599715 Trre1g00807 1 6092326 6100306 PCT