Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00807 ATGGAGTCCTTCTTCGTCAACTCTCTGTATACTGTTTCTCCTCAACTCACTATTTCGCCGCGAATCAAGCAAAGTAATGTACGGCGGTTGCGAATTTCGAGTTTAGCTGCTACGACGGGAAATTCCGCTAAAAACGGCGCCGTTGTAAGGCCGTTGCAGCTGCCGAGTAACTCCAGGTCGAATAACAGTGCGCTGGAGCAACTTGATATCGAGCGTGGTGTTTGCATCCCTTTCCGCAAGTACTCACCTGAGATTGTGAGGAATAAGGTATTAGAATCAAGAGGAGCTATTTTGTCTTTAATTTCACGAGGAGTGGAGATAGTTTTGAGTCTGGGTTTGTATTGGTCTGCCTTGGTGTATGATTTCCTAGTTGGAAGGGATGAAGAAGTTGTTCCATTTCGTGCTCGACAGCTTAGGAACCTCTTGTGTGATCTGGGCCCTTCCTTTATTAAAGCTGGTCAGGTCCTTGCAAACAGGCCAGATATCATTAGAGAAGATTATATGAGTGAACTTTGCATTCTTCAAGATGACGTCCCTTCATTTCCAAATGAAATTGCCTTCAGTATCATAGAGGAAGAACTGGGTCAGCCCCTTGAAGCTGTTTTCAGCAGAATCTCATCAGAGACAATAGCAGCTGCAAGTTTAGGTCAAGTTTACCGTGCTACTTTACGTGCCACTGGCGAGGATGTTGCTATAAAGGTTCAAAGGCCCGAGATAGAGCCCATAATTTATCGAGATCTTTTCCTGTTTCGCACTTTAGCTTCATTCCTAAATGGCATCAGTATACAGAAACTGGGGTGTAATGCTGAGCTGATTGTTGATGAATTTGGGGAAAAGCTTTTGGAAGAGCTTGACTATACACTGGAAGCCCGCAATATTGAAGATTTTCTTGAAAATTTTAAAAATGACCCCACCGTCAAAATCCCATTGGTTTACAAAGAATTTTGTGGGCCACGTGTATTAGTGATGGAATGGATTGATGGTATTAGGTGCACCAATCCACAGGCCATTAAAGAAGGCGGTATTGATCTAGATGGATTTCTAACAATCGGTGTGAGTGCTGCCCTTCGTCAGTTGTTGGAATTTGGATTATTTCACGGAGACCCTCACCCTGGAAATATTTTTGCCATGCGTGATGGACGGATTGCATATGTGGACTTTGGCAATGTTGCTGTTCTTAGTCAGCAAAATAAACAGATTTTAACTGATGCTGTTGTACACGCTGTGAATGAAGACTATACTGAGATGGCTAATGATTTCACCAGATTAGGCTTCCTGGCAGCAGGGACTGATGTCTCTCCAATAGTTCCTGCTTTAGAAGCAATTTGGCAGGACTCTGCTGGAAAAGGATTGGCAGATTTTAATTTTCGCAGTGTCACCGGGAAGTTTAACCAATTGGTTTACAATTATCCCATTCGAATCCCAGAAAGGTTTTCACTTGTAATCCGTTCTTTATTGACTCAAGAAGGCATCTGTTTTACTCTGAAGCCTGACTTCAAATTTCTCGAGGTTGCCTATCCATATGTGGCTAAGCGACTACTAACAGATCCAAATCCAGCTCTACGTGAAAGACTCATACAGGTTCTATTCAAAGATGGTCTTTTCCAGTGGAAACGGCTTGAAAACCTTATTGTTCTTGCAAAGGAAAATGTGGCCAAGATGAGCAGCAATCCAGCATTGCAAGTGAAAAACAAGCAAACCAAGAGAAACTGGAAAGTTGAAAAAAAACTGGACCTTACAGACACAATCAAAGATGGAGCTCGCCTTTTCCTTGTTGACGAAGGAATCCGCCGACAGCTTCTTCTTGCTTTAACCGAGGACTCAAAGCTTCATATAGAAGAGCTTGTTGATGTGTATAGGTTGGTTGAAGATCAGATAGATATACCCTCAGTGGCTGTAGAAGTAGTTCGAGACTTCCCAACTGTTGCCAGGGATCTCCTACTTTCATGGAGCGAGTCCGTTTTATCTGATAGGTAG 1977 0.4299 MESFFVNSLYTVSPQLTISPRIKQSNVRRLRISSLAATTGNSAKNGAVVRPLQLPSNSRSNNSALEQLDIERGVCIPFRKYSPEIVRNKVLESRGAILSLISRGVEIVLSLGLYWSALVYDFLVGRDEEVVPFRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMSELCILQDDVPSFPNEIAFSIIEEELGQPLEAVFSRISSETIAAASLGQVYRATLRATGEDVAIKVQRPEIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKNDPTVKIPLVYKEFCGPRVLVMEWIDGIRCTNPQAIKEGGIDLDGFLTIGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILTDAVVHAVNEDYTEMANDFTRLGFLAAGTDVSPIVPALEAIWQDSAGKGLADFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQWKRLENLIVLAKENVAKMSSNPALQVKNKQTKRNWKVEKKLDLTDTIKDGARLFLVDEGIRRQLLLALTEDSKLHIEELVDVYRLVEDQIDIPSVAVEVVRDFPTVARDLLLSWSESVLSDR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00807 658 ProSiteProfiles Protein kinase domain profile. 204 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00807 658 CDD ABC1_ADCK3-like 174 420 - -
Trre1g00807 658 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 79 616 - -
Trre1g00807 658 Pfam ABC1 atypical kinase-like domain 174 418 IPR004147 -
Trre1g00807 658 SUPERFAMILY Protein kinase-like (PK-like) 175 392 IPR011009 -
Trre1g00807 658 Gene3D Transferase(Phosphotransferase) domain 1 203 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00807 Trre-Chr1 6092326 6100306 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00807 - - gmx:100790292 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00807 1 6092326 6100306 Trre1g00807 1 6092326 6100306 ECH
Trre5g04184 5 43588393 43599715 Trre1g00807 1 6092326 6100306 PCT