LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre5g03582	ATGAAGGAAGAGAAAAAGGCTTCGTCGTTCGTCAAGAAAGGCGACCGACAACTGTTCACGGTGGAGCTCCGGCCAGGAGAGACAACCATAGTATCATGGAAGAAGCTGTTGAAAGACGCTAATAAACCTAACGGATCCGCTTCCACTTCTCAACTCTCCCGGCCGGAGGCTTTTCTGGGAGAACCTGTTGAGGTTGAGGAAAATGATGCAGCTCAGCCGCACCGTTTCAGTGCTGTAATAGAGAAGATTGAACGTCTTTACATGGGTAAGGATAGCAGTGATGATGAAGATCAGCCGGATGTTCCTGATGATGATCAGTATGATACTGAAGATTCTTTTATCGACGACGCTGAGCTGGATGAATATTTTCAGGTTGATAATTCCAAAGTCAAACATGATGGGTTCTTTGTAAATAGGGGGAAATTGGAACGCACTGAAGAGCCTCCCGTATTACCCAACCAGCAACCAAAGAAAAGGCGCAAAAAAGATATAGTGAAGAATCCAGGCGAAAATGATAATGATCATGGATCAAATAAGCATGTAAAAGTAGGCAAGGCAGCATATGGGAAAACAACTTCCACACAGGCGAAGAATGTGTGTAATTCGTCACAGAATTTTGTTGTACCCGATGGACATTATGAAGCCTTGAAACCTCAGAATCAATTGGATATCTATGGAATTAGTTCCAAAAAGAAAATTGCCGATACTAAACCAATATCGGTCTCTTCTGTCTCTTTGAAAACATCAAGTGATGATGTCCCTGTTGCCATGTCAGAAGAAAAAGATGCTGATAAGAAGATAGGAGCTTTTCAATCTAAGAACACAAGTGGATCATTTGATGTATCTCATCAGAAGTACAATGAAAAAGGTGCTTATGCACAATCCAAATCCCAACCTGGAAGACCCTCAACAAGTATTGATGGTTTAGAAAATCCTAGTCGGTCGAAAGAAAAAAATGGCAAGCGTCAACTGCCGGATCTCAACGTGGCTGTGGGAAAGTTTTCCACTAAAGCAACTAAATCTGAATACATGCACACGAAAGACGGGTCTAGTGTTAGGCCAAAATCTTCAATGCTTGAGAAGGCTCTTGGCGAGTTAGAGAAAATGGTTGCTGAGTCAAGGCCCCCTGCAGCGGAAAATCCGGAGGCTGATAATACATCCCAGGCAGTCAAAAGGAGGTTGCCCAGAGAAGTAAAGCTAAAGCTTGCTAAAGTTGCTAGACTAGCGGCAAGCCAAGGGAAAGTATCAAAAGAGTTAATTAATCGTCTTATGAGTATTCTTGGGCACTTGATGCAACTCAGAACATTAAAGAGAAACTTAAAAATAATGATCAGTATGGGTCTGTCGGCAAAGCAGGAGGAGGATGATAGGTTTCAACGGATAAAAAAGGAAGTTGTTGATATGATTAAGATGCAGGCCCCAGCTTTGGAATCCAAGCAACAGCAGAAAGCTGGAGCATCAGGTGATGTACAAGAATTTGGTCCTGATGGAAAATCAATAACTAAAAGGAATTTTAGTATGGACGCTGCATTGGAAGACAAGATTTGTGAACTCTACGACATTTTTATTGATGGCTTGGATGACAATGCAGGACCACAGATCAGAAAGTTGTATGCTGAGCTTGCAGGATTATGGCCAACTGGTTACATGGACAACCATGGGATCAAACGTGCAATTTGCAGGGCAAAAGAGAGGCGCAGAGCATCACACACAAAAAATAAGGATCAGGAAAAAATTAAGAGGAAGAAGTTGTTGGCTTCGAGGCAAGAGGATAGCATTCGACTTGATGCTGGCTTAGGCTCAGGCTCAGGCTCAGGCTCAATTACATCACAGCATAACCAACAAGAGAAATTGGTTACAGAATCTGGCAGTCTTGCTTTGACGACAACAAACAAGCCCGTTTCTAATACAAGCACAACTGTCCAGGTCCCCAGTCCTATGAATGGTTTAAAACAAGAAAAAGCAAAGGGAAGTTCAAGCAATGCCCTGGAAGATGTTCGTGTTGCTGATGGCGTTTTAACAAAGAAGCTGAAGAGAAAACCAGAACTTGAGTTGGAAGGAGCAAATAGTGGTCCTGAGAAGCTGACTTCTTTGCAGGGAGAAGAAAGGCACAAGTCCCAAAAGCAGTCCTCTGGTCTTCCCACCAAATCAAATCTTCAGCCAACATCCCTCCCAGGTCTTGAACAGTCAAGCTAA	2196	0.4299	MKEEKKASSFVKKGDRQLFTVELRPGETTIVSWKKLLKDANKPNGSASTSQLSRPEAFLGEPVEVEENDAAQPHRFSAVIEKIERLYMGKDSSDDEDQPDVPDDDQYDTEDSFIDDAELDEYFQVDNSKVKHDGFFVNRGKLERTEEPPVLPNQQPKKRRKKDIVKNPGENDNDHGSNKHVKVGKAAYGKTTSTQAKNVCNSSQNFVVPDGHYEALKPQNQLDIYGISSKKKIADTKPISVSSVSLKTSSDDVPVAMSEEKDADKKIGAFQSKNTSGSFDVSHQKYNEKGAYAQSKSQPGRPSTSIDGLENPSRSKEKNGKRQLPDLNVAVGKFSTKATKSEYMHTKDGSSVRPKSSMLEKALGELEKMVAESRPPAAENPEADNTSQAVKRRLPREVKLKLAKVARLAASQGKVSKELINRLMSILGHLMQLRTLKRNLKIMISMGLSAKQEEDDRFQRIKKEVVDMIKMQAPALESKQQQKAGASGDVQEFGPDGKSITKRNFSMDAALEDKICELYDIFIDGLDDNAGPQIRKLYAELAGLWPTGYMDNHGIKRAICRAKERRRASHTKNKDQEKIKRKKLLASRQEDSIRLDAGLGSGSGSGSITSQHNQQEKLVTESGSLALTTTNKPVSNTSTTVQVPSPMNGLKQEKAKGSSSNALEDVRVADGVLTKKLKRKPELELEGANSGPEKLTSLQGEERHKSQKQSSGLPTKSNLQPTSLPGLEQSS	731

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	153	181	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	371	390	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	138	196	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	477	497	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	602	659	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	254	268	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	563	663	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	269	310	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	710	731	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	236	328	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	236	252	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	87	113	-	-
	Trre5g03582	731	Pfam	HPC2 and ubinuclein domain	100	143	IPR014840	-
	Trre5g03582	731	PANTHER	CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS	9	717	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	96	113	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	683	731	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	40	59	-	-
	Trre5g03582	731	MobiDBLite	consensus disorder prediction	569	590	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre5g03582	Trre-Chr5	34041616	34048665	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre5g03582	-		-	tpra:123906274	1238.4

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre5g03582	5	34041616	34048665	Trre5g03582	5	34041616	34048665	ECH
	Trre1g01088	1	8200716	8213055	Trre5g03582	5	34041616	34048665	PCT