Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02791 ATGAATGCGAGCTACAGCTATTCTCCTGTATTGGTGCCGTATGATTCCCGCGTCTCTTCTTCTTGTTATGCAACAACAACAACACGCTCTTCTCATCACCGTCCTCTTGTTTCTCTATCTTTATCTCCTTTCTCACCCTCCAACCTTCTCTTCTTCCAAAACCCTAATTTCCTTACGGGGAACACTATCTTCGTTAAGATGCAGCGGTTCTGCTCTGTGAGTGGCATAAGTAAGAACAAAGCAATGGTGGAGAGGTTGCAACATTTTGGAGTAATTACATCAAGTAAGGTGGCTGAAGTGATGGAGACTGTTGATAGAGCTTTGTTTGTACCCAGTGGATCAGCACCTTATGATGACAGCCCCATGGCCATAGGCTACAATGCCACTATATCTGCACCTCACATGCATGCTACCTGCCTTCAGTTGCTGGAAGAGAATTTGCAACCTGGGATGCACGCCCTCGATGTTGGCTCTGGAACAGGGTATCTGACTGCGTGTTTTGCCTTGATGGTTGGACCCCAAGGTCGTGCTGTTGGCGTGGAGCATATTCCTGAATTGGTTTCCCTTGCAAAAGAAAATATTCAGAAAAGTGCTGCAGCTACACTATTGAAAGATGGTTCCCTTTCTGTTCATGTTGGTGATGGAAGGGAAGGTTGGCCAGAATTTGCTCCTTATGATGCCATTCACGTTGGAGCAGCAGCACCAGAAATTCCTCAACCACTTATAGACCAGTTGAAGCCTGGTGGGAGAATGGTAATTCCTGTTGGCAACATATTTCAAGATTTAAAGGTGGTGGATAAGAATTCTGATGGTTCTATCAGTGTCCGGACTGAGACCTCCGTTCGTTATGTGCCCCTCACTAGTCGAGAAGCTCAACTTCGCGGCTACTAA 891 0.4624 MNASYSYSPVLVPYDSRVSSSCYATTTTRSSHHRPLVSLSLSPFSPSNLLFFQNPNFLTGNTIFVKMQRFCSVSGISKNKAMVERLQHFGVITSSKVAEVMETVDRALFVPSGSAPYDDSPMAIGYNATISAPHMHATCLQLLEENLQPGMHALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELVSLAKENIQKSAAATLLKDGSLSVHVGDGREGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISVRTETSVRYVPLTSREAQLRGY 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02791 296 Gene3D Vaccinia Virus protein VP39 73 296 IPR029063 -
Trre5g02791 296 CDD AdoMet_MTases 154 255 - -
Trre5g02791 296 FunFam Protein-L-isoaspartate O-methyltransferase 71 296 - -
Trre5g02791 296 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 264 IPR029063 -
Trre5g02791 296 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 72 294 IPR000682 GO:0004719|GO:0036211
Trre5g02791 296 NCBIfam protein-L-isoaspartate O-methyltransferase 77 292 IPR000682 GO:0004719|GO:0036211
Trre5g02791 296 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 78 290 - -
Trre5g02791 296 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 213 228 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02791 Trre-Chr5 22234124 22236990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02791 K00573 - gmx:100810913 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02791 5 22234124 22236990 Trre5g02791 5 22234124 22236990 ECH
Trre15g02972 15 26557039 26560578 Trre5g02791 5 22234124 22236990 PCT