Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02972 ATGGAGCAATACTGGTCTGGGAGTGCCATCAATAAGAACAAAGGGATGGTGGAGAATTTGCAGAGTTATGGAATAATCAAATCTAGAAAGGTAGCTGAAGTAATTGAAAACATTGACAGAGGTTTATTTGTACCCAATGGGGCTCAACCTTACATAGACAGCCCCATGGCTATCGGCTACAATGTCACTATATCTGCACCACACATGCATGCAACCTGCCTTCAGTTGCTGGAGAACTATTTGCAACCTGGAATGCATGCTCTCGACGTTGGCTCTGGGACTGGATACCTGACAGCATGCTTTGCTTTGATGGTTGGACCCAATGGCCGTGCTGTTGGTGTGGAACATATTCCCGAATTGGTTTCCTTTTCAATCAAGAATATTGAAAAAAGTGCCGCAGCTCCACTATTGAAAGATGGCTCCCTTTCTGTGCATGAGTGTGATGGAAGGCAGGGTTGGCCTGAGTTTGCTCCTTATGATGCCATTCACGTTGGAGCAGCGGCACCAGAAATTCCCCAACCACTTATTGATCAGTTGAAGCCAGGCGGTCGAATGGTTATTCCAGTTGGAAACGTTTATCAAGATTTAAAGGTTGTGGATAAGAACTCCGACGGTTCTATCAGTATCCGGACTGAGACCTCTGTTCGATATGTGCCTCTCACTAGCAAGGAAGCTCAACTTAAAGGGGAATAA 693 0.456 MEQYWSGSAINKNKGMVENLQSYGIIKSRKVAEVIENIDRGLFVPNGAQPYIDSPMAIGYNVTISAPHMHATCLQLLENYLQPGMHALDVGSGTGYLTACFALMVGPNGRAVGVEHIPELVSFSIKNIEKSAAAPLLKDGSLSVHECDGRQGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNVYQDLKVVDKNSDGSISIRTETSVRYVPLTSKEAQLKGE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02972 230 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 5 227 IPR000682 GO:0004719|GO:0036211
Trre15g02972 230 NCBIfam protein-L-isoaspartate O-methyltransferase 12 226 IPR000682 GO:0004719|GO:0036211
Trre15g02972 230 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 224 - -
Trre15g02972 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 196 IPR029063 -
Trre15g02972 230 CDD AdoMet_MTases 88 189 - -
Trre15g02972 230 FunFam Protein-L-isoaspartate O-methyltransferase 4 230 - -
Trre15g02972 230 Gene3D Vaccinia Virus protein VP39 5 229 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02972 Trre-Chr15 26557039 26560578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02972 K00573 - gmx:100527082 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02972 15 26557039 26560578 Trre15g02972 15 26557039 26560578 ECH
Trre15g02972 15 26557039 26560578 Trre5g02791 5 22234124 22236990 PCT