Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02766 ATGGTGTCTGCCACCGGGGTTGCTACTGCACAGCCTCTTTTTTCTTTTGGATTGATTTCTGATGTCCAATACGCTGACATTCCTGATGGTCGCTCATTCCTCGGTGTTCCGCGGTATTATAGGCATAGTTTTCTTGTATTGCAGAGAGCAGTTAAAGAATGGAATACTCATCAGAAGCATAAGTTTGTGATTAATTTAGGAGATATTGTTGATGGGTTTTGTCCTAAAGATCAATCTATTCATGCTGTAAAGAAAGTTGTGGATGAATTTGAAATGTTCAGGGGACCTGTGTATCATATGGTTGGCAATCACTGTCTTTACAATCTTCCTCGAAGCACGTTGCTTCCATTATTGAAGATCCAAACCCTTGATGGTTGTGCTTACTATGATTTCTCACCTGTGCCTGAATATAGATTTGTAGTTTTGGATAGCTATGACATCAGTGCCATTGGTTGGCCTCAAGATCATCCAAAAACATTGGAGGCCATGAAATTGCTTAGGGAGAAGAATCCAAATAAAGATAAGAACAGTCCAACAAATATGGTGGGGCTTGAAAGAAGGTTTCTTATGTTCAACGGAGGTGTTGGAAAGGAACAGATGAAATGGTTAGATGGTGTTCTCCAGGATGCAACCAATTTGAAACAGAAGGTGGTTGTCGCATGCCATCTGCCTCTAGATCCTTGTGCATCAAGTGAGGAGGCACTATTGTGGAATTGCGATGAAGTGATGGATTTGATACACAGATACAATTGTGTTAAAGTTGTTCTTGCTGGGCATGATCATAAAGGTGGGTATTCCATTGATTCTCATGGGGTACACCATAGAACTCTTGAAGCTGCTCTTGAATGTCCTCCTGGCACAGATGCATTTGGAAGTGTTTATGTCTATGATGACCGAATATCACTCGTAGGAACTAATAGAATGGCGAGTACCGAAATGCATTTTGATCACCAAACTTCAATTTGTATGACATGA 975 0.4082 MVSATGVATAQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSFLVLQRAVKEWNTHQKHKFVINLGDIVDGFCPKDQSIHAVKKVVDEFEMFRGPVYHMVGNHCLYNLPRSTLLPLLKIQTLDGCAYYDFSPVPEYRFVVLDSYDISAIGWPQDHPKTLEAMKLLREKNPNKDKNSPTNMVGLERRFLMFNGGVGKEQMKWLDGVLQDATNLKQKVVVACHLPLDPCASSEEALLWNCDEVMDLIHRYNCVKVVLAGHDHKGGYSIDSHGVHHRTLEAALECPPGTDAFGSVYVYDDRISLVGTNRMASTEMHFDHQTSICMT 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02766 324 Gene3D - 9 308 IPR029052 -
Trre5g02766 324 CDD MPP_Nbla03831 14 302 IPR041869 -
Trre5g02766 324 PANTHER - 6 316 - -
Trre5g02766 324 Pfam Calcineurin-like phosphoesterase 15 262 IPR004843 GO:0016787
Trre5g02766 324 SUPERFAMILY Metallo-dependent phosphatases 12 309 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02766 Trre-Chr5 22067754 22068728 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02766 K01517 - gmx:100792911 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02766 5 22067754 22068728 Trre5g02766 5 22067754 22068728 ECH
Trre5g02766 5 22067754 22068728 Trre15g02947 15 25980599 25981576 PCT