Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02947 ATGGGTTCAGAAAATGGTTTAAAAAGTGTTCATGACAAACAACCTCTCTTTTCATTTGGATTGATATCTGATGTGCAATATAGCGATATTCCTGATGGTCGTTCGTTCCTCGGTGTTCCTCGTTACTATAGGCATAGCATTCTTGTGTTACAAAGAGCAGTTCAAAATTGGAATAATCATCGAAAACACAAATTTGTGATAAATTGTGGAGATATTGTTGATGGATTTTGTCCAAAAGACCGGTCTCTTAATACTGTAAAGAAAATTGTGGATGAATTTGACAAATTCGAAGGACAAGTATATCATTTAATTGGAAATCACTGTCTATACAATCTACCTCGCAAAAAGCTACTTCCATTGTTAAAGATACATAATCTTGAAGGCCATGCTTATTATGATTTTTCGCCCGTTCCTGAATATAGATTTGTAGTTCTTGACGGATATGATATAAGTGCAATTGGTTGGCCACAAGATCATCCAAGAACATTAGAAGCAATGAAATTTCTCAAAGAGAAGAATCCAAATGAAGATAAGAATAGTCCAACAGGTTTGGTTGGACTTGAAAGAAGGTTTCTTATGTTCAATGGAGGTGTTGGAAAGGAACAAATGGAATGGTTGAATAATGTTCTTCAAGAATCAACAAAATTGAAACAAAAAGTTGTGGTTAGTTGTCATTTGCCTCTAGATCCTAGTGCATCATCTAAGGAAGCATTGTTGTGGAATTATAATGAAGTGATGAATTTGATACATAGATATAGTTGTGTTAAGGTTTGTTTTTCTGGTCATGATCATAAAGGTGGATATTCAATTGATTCACATGGTATACATCATAGAGTTCTTGAAGCTGCATTGGAATGTCCTCCTGGTACAAATGCATTTGGATATGTTGAGGTTTATGAGGACAAAATTTCACTTTATGGTACTGATAGAATGAAGAGTACAAACATGTATTTTAAAAATCCTAAAAGGAATTTATAA 978 0.3374 MGSENGLKSVHDKQPLFSFGLISDVQYSDIPDGRSFLGVPRYYRHSILVLQRAVQNWNNHRKHKFVINCGDIVDGFCPKDRSLNTVKKIVDEFDKFEGQVYHLIGNHCLYNLPRKKLLPLLKIHNLEGHAYYDFSPVPEYRFVVLDGYDISAIGWPQDHPRTLEAMKFLKEKNPNEDKNSPTGLVGLERRFLMFNGGVGKEQMEWLNNVLQESTKLKQKVVVSCHLPLDPSASSKEALLWNYNEVMNLIHRYSCVKVCFSGHDHKGGYSIDSHGIHHRVLEAALECPPGTNAFGYVEVYEDKISLYGTDRMKSTNMYFKNPKRNL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02947 325 Pfam Calcineurin-like phosphoesterase 18 265 IPR004843 GO:0016787
Trre15g02947 325 CDD MPP_Nbla03831 17 305 IPR041869 -
Trre15g02947 325 Gene3D - 12 311 IPR029052 -
Trre15g02947 325 PANTHER - 8 319 - -
Trre15g02947 325 SUPERFAMILY Metallo-dependent phosphatases 15 312 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02947 Trre-Chr15 25980599 25981576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02947 K01517 - gmx:100780293 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02947 15 25980599 25981576 Trre15g02947 15 25980599 25981576 ECH
Trre5g02766 5 22067754 22068728 Trre15g02947 15 25980599 25981576 PCT