Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02647 ATGGCTGGAGGAGGTGGAGCTCCATCGAAATCAGATGAACCACAACCACATCCACCAAAGGATCAACTACCAAATATTTCTTACTGCATTACTAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTTTCTAGTGATGCTTGGTACAACTGTGCTCATTCCAACTGCTCTTGTTCCTCAGATGGGAGGTGGAAATGCGGAGAAGGCTAGAGTTATTGAAACATTGCTTTTTGTAGCCGGTATTAATACATTGGTGCAAACACTCTTTGGATCTCGATTACCTGCAGTAATCGGAGGGTCTTATACTTATGTGCCAACCACAATCTCAATTATTCTTGCTGGTCGATTCAGTGGTGAACCAGATCCAATAGAGAAATTCAAGAAGATAATGAGGGCAGTTCAGGGTGCTCTTATTGTTGCCTCAACTCTTCAAATAGTACTCGGCTTTAGTGGCCTTTGGCGTAATGTTGCAAGGTTCTTAAGTCCACTTTCAGCAGTTCCATTGGTTTCTCTTGTTGGTTTTGGGTTGTACGAGTTAGGTTTTCCTGGGGTTGCTAAGTGTATAGAGATTGGACTGCCAGAGCTTATTTTGCTAGTATTTGTTTCACAGTATGTGCCCCATGTGCTACATTCCGGGAAAAATATCTTTGACCGGTTTGCTGTTTTATTTACAATTGTAATTGTGTGGATATATGCTCATCTACTCACTGTTGGAGGGGCCTATAATGGCGCTGCACCAAAAACACAGGCATCCTGCCGCACTGATCGTGCTGGACTTATCGATGCTGCTCCTTGGATCAGAGTTCCATATCCCTTTCAATGGGGAGCACCTACATTTGATGCAGGCGAAGCATTTGCTATGATGATGGCATCTTTCGTTGCTCTTGTAGAGTCCAGTGGAGCTTTCATTGCTGTCTATAGGTATGCAAGTGCAACACCATTACCGCCTTCTATTCTCAGTCGGGGTATTGGTTGGCAGGGAGTCGGCATTCTGTTATCAGGATTGTTTGGAACAATTAGTGGATCATCCGTGTCTGTAGAAAACGCAGGTCTTTTGGCTTTGACGCGTGTTGGCAGTAGAAGAGTTGTGCAGATATCTGCTGGGTTCATGATTTTCTTTTCAATTCTCGGAAAATTTGGAGCAGTTTTCGCCTCTATCCCACCTGCAATTATTGCTGCTCTTTACTGCTTATTCTTTGCTTATGTTGGTGCTGGAGGAATTAGTTTTCTTCAGTTCTGCAACCTTAACAGTTTTAGAACAAAGTTCATATTAGGCTTCTCTATATTCTTGGGCTTGTCTATACCACAGTACTTCAATGAGTATACAGCAATTAATGGCTTCGGTCCAGTCCACACAGGCGGAAGATGGTTCAATGATATAATTAATGTCCCATTTCAATCAAAAGCATTTGTTGCGGGTGTTGTGGCATATTTCCTAGACAATACATTACATAAGAAGGATTCATCTATTAGAAAGGACAGAGGCAAACATTGGTGGGACAAGTACAAATCCTTCAAGGGTGACACAAGAAGTGAGGAGTTCTATTCACTACCTTTCAATCTAAACAAATATTTTCCATCTGTTTAA 1599 0.4234 MAGGGGAPSKSDEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNAEKARVIETLLFVAGINTLVQTLFGSRLPAVIGGSYTYVPTTISIILAGRFSGEPDPIEKFKKIMRAVQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCIEIGLPELILLVFVSQYVPHVLHSGKNIFDRFAVLFTIVIVWIYAHLLTVGGAYNGAAPKTQASCRTDRAGLIDAAPWIRVPYPFQWGAPTFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTISGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPAIIAALYCLFFAYVGAGGISFLQFCNLNSFRTKFILGFSIFLGLSIPQYFNEYTAINGFGPVHTGGRWFNDIINVPFQSKAFVAGVVAYFLDNTLHKKDSSIRKDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPSV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02647 532 MobiDBLite consensus disorder prediction 1 26 - -
Trre5g02647 532 Pfam Permease family 38 442 IPR006043 GO:0016020|GO:0022857|GO:0055085
Trre5g02647 532 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 9 530 - -
Trre5g02647 532 NCBIfam purine/pyrimidine permease 40 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02647 Trre-Chr5 20778431 20782935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02647 7 532 Organic Solute Cotransporters AT5G49990 79.848 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02647 - - gmx:100812585 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02647 5 20778431 20782935 Trre5g02647 5 20778431 20782935 ECH
Trre15g02810 15 24107361 24112212 Trre5g02647 5 20778431 20782935 PCT