Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02810 ATGGCAGGAGGTGGTGGTGGAGGAGCTCCGGCACCAAAAGCAGATGAGCCACAACCACATCCACCAAAGGATCAGCTACCAAATGTTTCTTATTGCATAACAAGTCCTCCACCTTGGCCTGAGGCCATACTTCTTGGTTTTCAACATTATCTTGTGATGCTGGGGACAACTGTGTTAATTCCTACTTCTCTCGTTCCCCAGATGGGAGGTGGCAATGAGGAGAAAGCTAAAGTTATCCAAACACTACTCTTTGTGGCTGGAATCAACACTTTGGTGCAAACCCTGTTTGGAAGCCGATTGCCTGCAGTAATCGGAGGGTCTTATACCTTTGTTCCGACGACAATCTCAATCATTCTTGCTGGTCGGTTCAATGATGAGCCAGATCCTATAGAGAAATTCAAGAAGATTATGCGGGCAACTCAAGGTGCTCTTATTGTCGCTTCAACCCTTCAAATAGTACTAGGGTTTAGTGGTCTTTGGCGTAATGTTGCAAGGTTCTTAAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTATACGAATTGGGCTTTCCAGGGGTTGCTCAATGTGTAGAGATTGGATTGCCAGAGCTTGTATTGCTAGTATTTGTTTCACATTTTGTGCCCCATGTGCTTCATTCAGGAAAACATGTGTTCGACCGTTTCTCTGTTTTATTCACGGTTGCAATTGTCTGGCTATATGCTTATATTCTCACCGTTGGAGGGGCCTATAACCACGTTAAACATAAAACACAGATAACCTGCCGCACTGATCGTTCTGGCCTAATAGAGGCTGCTCAATGGATTCGTGTTCCGTATCCATTTCAATGGGGTGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTGCTCTAGTAGAGTCCAGTGGAGCTTTTATTGCTGTTTATCGGTTCGCAAGTGCAACACCATTACCACCATCGATTCTTAGTCGGGGTATTGGTTGGCAGGGTGTTGGCATTCTGTTGTCAGGATTGTTCGGAACTGGCATCGGATCTTCTGTATCTGTAGAAAATGCTGGTCTTTTGGCTTTGACACGTGTTGGTAGTCGAAGAGTGGTGCAAATATCTGCCGGGTTTATGATTTTCTTTTCAATTCTAGGAAAATTTGGAGCAGTATTCGCATCCATTCCCCCTCCCATTGTTGCAGCACTATACTGCTTGTTCTTCGCTTATGTTGGTTCGGGAGGTCTAAGTTTTCTTCAATTCTGCAACCTCAATAGTTTTAGGACAAAGTTTGTGTTAGGCTTTTCCATCTTCCTGGGCTTATCTATCCCACAGTACTTCAATGAGTACACCGCAATTAATGGTTTCGGTCCAGTTCACACCGGTGCAAGATGGTTCAATGATATAGTAAATGTGCCGTTCCAATCAAAAGCATTTGTTGCTGGAGTTATAGCATATTTCTTGGATAACACGCTACATAAGAAAGAATCTGCTATTAGAAAAGATAGAGGAAAGCATTGGTGGGACAAGTACAGGTCCTTCAAGACTGACACAAGAAGTGAGGAGTTTTATTCACTGCCTTTCAATCTAAACAAATACTTCCCATCTGTGTAA 1608 0.4372 MAGGGGGGAPAPKADEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGINTLVQTLFGSRLPAVIGGSYTFVPTTISIILAGRFNDEPDPIEKFKKIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAQCVEIGLPELVLLVFVSHFVPHVLHSGKHVFDRFSVLFTVAIVWLYAYILTVGGAYNHVKHKTQITCRTDRSGLIEAAQWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRFASATPLPPSILSRGIGWQGVGILLSGLFGTGIGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIVAALYCLFFAYVGSGGLSFLQFCNLNSFRTKFVLGFSIFLGLSIPQYFNEYTAINGFGPVHTGARWFNDIVNVPFQSKAFVAGVIAYFLDNTLHKKESAIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFNLNKYFPSV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02810 535 MobiDBLite consensus disorder prediction 1 28 - -
Trre15g02810 535 Pfam Permease family 41 445 IPR006043 GO:0016020|GO:0022857|GO:0055085
Trre15g02810 535 NCBIfam purine/pyrimidine permease 43 441 - -
Trre15g02810 535 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 10 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02810 Trre-Chr15 24107361 24112212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02810 11 535 Organic Solute Cotransporters AT5G49990 80.228 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02810 - - gmx:100804903 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02810 15 24107361 24112212 Trre5g02647 5 20778431 20782935 PCT