Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02301 ATGAGTAAGGATCTGAAGAAAACTGCCTCTGATGGCCAAGAGAAGATGTTAGCAGTATCACTGTCACAAGAGCAACAGACAAAGATCATTGAGGTGAGAAAGTTGTTAGGAACATTATCAGACAAAGAATCTGTGTATTGTTCTGATGCATCTATTTCAAGGTATTTAAAATCACAAAATTGGAATGTGAAGAAAGCAACTCAAATGTTGAAACAAAGCCTAAAATGGAGAAATGAGTACAAACCTGAAGAGATCCACTGGGACGAGGTTTCTAATGAAGCCGAGACAGGGAAAATATACAGACCAAATTATTGTGACAAGCTTGGAAGACCAGTGCTTATAATGAGAACAAATCGCCAGAAGTCGAAGATATTAAAAGATGAGATTAAGCATTTTGTTTACTGCATGGAGAATGCAATTTTAAATCTTCCACCTCACCAAGAACAGGTGGTATGGCTGGTTGATTTCCATTGTTTCAATTTGTCAAATGTATCATTCAAGATATCACGTGAAGTTAGCCATATATTACAAAAACATTATCCTCAGCGCCTCGGATTGGCAATCATGTATGATGCACCTGGGATTTTCCAACCATTCTTCGCGATGGTAAAGGTCCTGCTTGAGCCAGAGAGCTATAATAAGGTAAAGTTTGTTTACTCCAATGACCAAAATACAAAGAAGATTATGGAAGGTTTGTTTGACATGGATCAACTTGAACCTGCATTTGGTGGGACTGATGACACAGAATTTGATATGAACAAGTATGCTAAGAGAATGAGAGAGGAAGATAACAAAATGCATTCCTTTTGGACTAAGGCAAACCCTCTATCATCAGTCACACAGAATGTTCCTTCTTCTGATTCAATCGGGTTAGAAACAGATTCTGATGCTTCTGACAAAGAGAAAATATTAAGTTCCTCTATTCCTAACCCTGATAAATATATCTTGGTTAATCGTCAGGACAAAAATGTTGTGGCATTAGAATGA 987 0.3739 MSKDLKKTASDGQEKMLAVSLSQEQQTKIIEVRKLLGTLSDKESVYCSDASISRYLKSQNWNVKKATQMLKQSLKWRNEYKPEEIHWDEVSNEAETGKIYRPNYCDKLGRPVLIMRTNRQKSKILKDEIKHFVYCMENAILNLPPHQEQVVWLVDFHCFNLSNVSFKISREVSHILQKHYPQRLGLAIMYDAPGIFQPFFAMVKVLLEPESYNKVKFVYSNDQNTKKIMEGLFDMDQLEPAFGGTDDTEFDMNKYAKRMREEDNKMHSFWTKANPLSSVTQNVPSSDSIGLETDSDASDKEKILSSSIPNPDKYILVNRQDKNVVALE 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02301 328 FunFam Phosphatidylinositol transfer protein 3 5 279 - -
Trre5g02301 328 SMART sec14_4 93 247 IPR001251 -
Trre5g02301 328 Gene3D - 1 282 IPR036865 -
Trre5g02301 328 PANTHER GH16843P 6 275 - -
Trre5g02301 328 Pfam CRAL/TRIO domain 95 244 IPR001251 -
Trre5g02301 328 CDD SEC14 95 245 IPR001251 -
Trre5g02301 328 MobiDBLite consensus disorder prediction 277 292 - -
Trre5g02301 328 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 87 250 IPR001251 -
Trre5g02301 328 SUPERFAMILY CRAL/TRIO N-terminal domain 20 89 IPR036273 -
Trre5g02301 328 MobiDBLite consensus disorder prediction 277 307 - -
Trre5g02301 328 SUPERFAMILY CRAL/TRIO domain 87 266 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02301 Trre-Chr5 17442263 17444352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02301 K26544 - gmx:100777106 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03084 9 39274887 39277214 Trre5g02301 5 17442263 17444352 PCT