Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02232 ATGCGCCAATCACTTCTCTCTAACCACAACAACAACAACTCCGACAAACCCCAACCGTCACCGGTTATTGTCACCAGCCGTAGCAGCCGGAGAGTTTCACCAACAAGCATAACAATCGAATTCGAAAGAATCGAAAAAACTAAAAAAACCGCCAAAAGCCTCTTACCAAACGGTGATTCTTACATGGGAAGTTTCTCCGGCAACGTACCGAATGGATCGGGGAAATATTCATGGAAAGATGGATGTATCTACGAAGGAGAATGGAAAAGAGGAAAAGCTTCCGGTAAAGGAAATTTCTCATGGCCTTCTGGAGCTATCTATGTAGGCGAATTTAAATCGGGTCGAATGGAAGGTTCTGGAACGTTTACCGGATCCGACGGAGATATTTACAGTGGTTCATGGATTTCTGATAGAAAAAACGGTTACGGAAAAAAGCGTTACGTTAACGGTGATTATTATGAAGGTTGGTGGAAAAAGAATATTCAAGAAGGACATGGAAGGTATGTTTGGAAAAACGGGAATGAGTATATTGGTGAATGGAAGAACGGCGTTATTAACGGAAGAGGAACGCTTATTTGGTCGAATGGGAATCGATATGAAGGTGAATGGGAGAATGGTGTAACGAAAGGGCAAGGTGTGTTTACTTGGCCTGATGGAAGTTGTTATGTTGGGAATTGGAATAATAGTGATGTCAAAATGCATTTATTGAATGGAACTTTTTATCCTGGTGATGATTTTGCTATAACAATGAGAAAAAGATCTTCTGTTGAAGTTGAAGGTGAAAACAATTTTAGGAAGATTTGTATTTGGGAATCTGATGGTGAAGCTGGTGATATAACTTGTGATATAGTTGATAATGTGTCGGTTTTGAGTAGGATTGGGAGTGGAACTGTTTCAGATCCACAAGAGATTAAGCAGCTTCAGTTTAATCGGAATCATTGTAGTTTTGCTTCCGAGGTTAAGAGACCGGGTGAAACTATATCGAAAGGGCATAAGAATTATGATCTTATGCTTAATTTGCAATTGGGTATAAGGCACTCTGTTGGTAAGGAAGCTTCTATATCGCGAGAGCTAAAACAGAGTGATTTTGATCCGAAGGAGAAGTTTTGGACTAGGTTTCCTTCTGAAGGGTCTAAGGTTACGCCACCACATCAATCGATGGAGTTCCGTTGGAAAGATTACTGCCCTATGGTCTTTAGACAATTGAGGAAACTATTTCAAGTGGATCCTGCGGAATACATGTTAGCTATATGCGGTAACGCTGCCCTCAGGGAGCTTTCATCCCCTGGCAAAAGTGGAAGCTTCTTCTACTTGACTCAAGATGACAGGTTTATGATAAAGACAGTGAAAAAATCTGAAGTCAAGGTACTTCTTCGGATGCTTCGAAGTTATTACCAACATATTTCTCAGTACGAGAATTCACTTGTGACAAAATTCTATGGGGTACATTGTGTCAAACCAATTGGGGGCCAGAAGACCCGGTTCATTGTGATGGGCAATCTTTTCTGCTCAGAATATCCAATCCATAGACGATTTGACTTGAAGGGATCGTCACATGGCCGTGCAACAGATAAAACTGAAGAGGAGATTGATGAAACTACCACCCTCAAGGACTTGGATCTCAATTTTGTATTTCGCCTGCAAAGCAATTGGTACAAGGATCTCATCAAGCAAATTGAGCGGGATTGCGAGTTTTTGGAAGCCGAGGGGATTATGGATTATAGTCTTTTGGTCGGCATGCATTTTCGCGATGATAATACAGTTGACAAAATGGGACTGTCACCGTTTCTTTTGCGCACTGGCAAGCAGGACTCTTATCAGAGTGAAAAGTTTATGCGTGGTTGTCGCTTCCTTGAAGCAGAGCTACAGGACAGGGATCGAGTCAAATCTGGCCGGAAATCCTTGATTAGATTGGGAGCTAATATGCCGGCTAGAGCAGAGCGCATGGCTCGGAGGAGTGATTTCGACCAGTACAGTAGTGGTGGAATCAGCCATTTTACTCCTTATCGCATTGGGGAGACCTATGATGTTGTTCTATATTTTGGCATTATAGACATTTTACAAGATTACGACATCAGCAAGAAGCTAGAGCATGCATACAAGTCCTTGCAGGTTGACCCTTCATCAATCTCAGCTGTTGATCCAAAGCTGTACTCCAAGAGGTTTCGCGATTTCGTAGCGCGAATATTCAGTGAAGACCGGTAG 2205 0.4218 MRQSLLSNHNNNNSDKPQPSPVIVTSRSSRRVSPTSITIEFERIEKTKKTAKSLLPNGDSYMGSFSGNVPNGSGKYSWKDGCIYEGEWKRGKASGKGNFSWPSGAIYVGEFKSGRMEGSGTFTGSDGDIYSGSWISDRKNGYGKKRYVNGDYYEGWWKKNIQEGHGRYVWKNGNEYIGEWKNGVINGRGTLIWSNGNRYEGEWENGVTKGQGVFTWPDGSCYVGNWNNSDVKMHLLNGTFYPGDDFAITMRKRSSVEVEGENNFRKICIWESDGEAGDITCDIVDNVSVLSRIGSGTVSDPQEIKQLQFNRNHCSFASEVKRPGETISKGHKNYDLMLNLQLGIRHSVGKEASISRELKQSDFDPKEKFWTRFPSEGSKVTPPHQSMEFRWKDYCPMVFRQLRKLFQVDPAEYMLAICGNAALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYQHISQYENSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRATDKTEEEIDETTTLKDLDLNFVFRLQSNWYKDLIKQIERDCEFLEAEGIMDYSLLVGMHFRDDNTVDKMGLSPFLLRTGKQDSYQSEKFMRGCRFLEAELQDRDRVKSGRKSLIRLGANMPARAERMARRSDFDQYSSGGISHFTPYRIGETYDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFVARIFSEDR 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02232 734 CDD PIPKc_AtPIP5K_like 333 729 - -
Trre5g02232 734 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 70 731 IPR023610 -
Trre5g02232 734 SMART morn 197 218 IPR003409 -
Trre5g02232 734 SMART morn 82 103 IPR003409 -
Trre5g02232 734 SMART morn 174 195 IPR003409 -
Trre5g02232 734 SMART morn 59 80 IPR003409 -
Trre5g02232 734 SMART morn 151 172 IPR003409 -
Trre5g02232 734 SMART morn 105 126 IPR003409 -
Trre5g02232 734 SMART morn 128 149 IPR003409 -
Trre5g02232 734 FunFam Phosphatidylinositol 4-phosphate 5-kinase 319 500 - -
Trre5g02232 734 Pfam MORN repeat 199 220 IPR003409 -
Trre5g02232 734 Pfam MORN repeat 130 151 IPR003409 -
Trre5g02232 734 Pfam MORN repeat 107 128 IPR003409 -
Trre5g02232 734 Pfam MORN repeat 153 174 IPR003409 -
Trre5g02232 734 Pfam MORN repeat 176 198 IPR003409 -
Trre5g02232 734 Pfam MORN repeat 61 82 IPR003409 -
Trre5g02232 734 Pfam MORN repeat 84 104 IPR003409 -
Trre5g02232 734 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 148 229 - -
Trre5g02232 734 Gene3D - 91 135 - -
Trre5g02232 734 Gene3D - 183 241 - -
Trre5g02232 734 Gene3D - 136 182 - -
Trre5g02232 734 Gene3D - 45 90 - -
Trre5g02232 734 SUPERFAMILY SAICAR synthase-like 329 730 - -
Trre5g02232 734 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 56 173 - -
Trre5g02232 734 SMART PIPK_2 359 731 IPR002498 GO:0016307|GO:0046488
Trre5g02232 734 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 418 728 IPR002498 GO:0016307|GO:0046488
Trre5g02232 734 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 319 500 IPR027484 -
Trre5g02232 734 MobiDBLite consensus disorder prediction 1 31 - -
Trre5g02232 734 Gene3D - 501 730 - -
Trre5g02232 734 PIRSF PIP5K_plant 5 253 IPR017163 GO:0005524|GO:0016308
Trre5g02232 734 PIRSF PIP5K_plant 243 734 IPR017163 GO:0005524|GO:0016308
Trre5g02232 734 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 328 730 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02232 Trre-Chr5 16855335 16858895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02232 28 733 Acyl Lipid Metabolism Gene Families AT1G77740 72.969 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02232 K00889 - gmx:100813118 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02232 5 16855335 16858895 Trre5g02232 5 16855335 16858895 ECH
Trre5g02232 5 16855335 16858895 Trre13g02638 13 24721065 24724831 PCT