Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02638 ATGCTACTGCCGCTGATTCTAACTACCTCTCCGCCGCGCCTCGCCTCGCCTCGCCGCCGGAGATATCTACTCGTCTCAGCAGCCTCATCCTCAGCAATCAACGGCGGTGGCGACCACTACACCTTACTCGGCGTCACCCGTTCTGCTAACGCTGTTGAAATCAAACGTGCTTATCGTCTCCTCGCTCGCAAGTATCATCCTGATGTTAGCAAGGATTCACATGCCTCTGAATTGTTCAAGAGTATCCGTCATGCGTATGAAGTACTATCGGATGAAACAACAAGATTTCGGTATGATCGAGAACTTCAATCCAGTCACAAGCCATACCAAGAAAAGTGGAGTTACAACACTGAATTTGAAGACGAGGTAAGAAGATATAGGTGGGCTTACATGAGGAAGAAAATGCGCAGCGAAAGATACTGGGAGCATTACAATATCAATGAGGATTACTACAGCAGCGAAACAGATGAGAAGGAAGATGAAGAAAATTTAAATGAAGAAAGAGGTTCATTTATTGAAGTCATTCGATCAGCATTCTTGTCGCTATTATTATTCCAAACATTAGGATCCCAACTCTCCCTTACATTTAGCAGTCTGACAGCATTGTTTGATAGAAAATTAGACGCCGGCTATAAAGTTGGTTATGTAATTGCGTGGATTTTGGGCGGGAGGGGCGGCGTAATATTAACATTGTTCTTGTCATTTGCAAGTTGGGTTTTTGGGAAAACGAGTAGTAGTGTGGTTGCATTATTTATGGTAGCCATGTGGGTTGGCTCTTCCCTTTCAAGTTATGCACCACTTCCACAGGGTGCTCTGTTAACACTTATCTACATGTCCATTAAGCTGCAATCTGACCAAATATAA 864 0.4398 MLLPLILTTSPPRLASPRRRRYLLVSAASSSAINGGGDHYTLLGVTRSANAVEIKRAYRLLARKYHPDVSKDSHASELFKSIRHAYEVLSDETTRFRYDRELQSSHKPYQEKWSYNTEFEDEVRRYRWAYMRKKMRSERYWEHYNINEDYYSSETDEKEDEENLNEERGSFIEVIRSAFLSLLLFQTLGSQLSLTFSSLTALFDRKLDAGYKVGYVIAWILGGRGGVILTLFLSFASWVFGKTSSSVVALFMVAMWVGSSLSSYAPLPQGALLTLIYMSIKLQSDQI 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02638 287 Gene3D DnaJ domain 37 143 IPR036869 -
Trre13g02638 287 ProSiteProfiles dnaJ domain profile. 38 102 IPR001623 -
Trre13g02638 287 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 26 100 - -
Trre13g02638 287 FunFam Uncharacterized protein 35 182 - -
Trre13g02638 287 SMART dnaj_3 37 94 IPR001623 -
Trre13g02638 287 CDD DnaJ 38 91 IPR001623 -
Trre13g02638 287 SUPERFAMILY Chaperone J-domain 38 107 IPR036869 -
Trre13g02638 287 Pfam DnaJ domain 38 99 IPR001623 -
Trre13g02638 287 PRINTS DnaJ domain signature 40 58 IPR001623 -
Trre13g02638 287 PRINTS DnaJ domain signature 74 94 IPR001623 -
Trre13g02638 287 PRINTS DnaJ domain signature 58 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02638 Trre-Chr13 24721065 24724831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02638 38 103 Miscellaneous Gene Families AT5G49580 42.029 1.12e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02638 - - gmx:100791619 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02232 5 16855335 16858895 Trre13g02638 13 24721065 24724831 PCT