Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01991 ATGGCAACAAAACAACCTCTCTGGTCATCTCCGACTGAGTTCGACGCCGCGTTCGGCTTCCCCACCGAGTTCCCTTACGAGTTCGAACTATCTTCACCTGCTGTTGAATCTGTAACCTCAACAGACTCAACAGAGAACAGCGACGAAGAAGAAAACAGCTTCTTCTTTGGCTTAACTCAACGACTGAGTCAATCCACTCTCCATGAGACTCGGAATCAACTCACTACAGAACCAATCACCACATGGAACAACAAACCAGAATCAAAATCTCATTCCATCAAAACTCGTGACGTGGCCGGTTCACCTCAGTCTATTCTGAGTGGAATCGGTAGCTGGTCTGGTCGAAGTAACGGCTCCGGTGACGGAAGCCCAAACGGAAACTCTCGTGTTCCGTCCCCAGTAACGGCGCCGTTTGTTGACCCTTGGGATGTTATTTACGCTGCTGCAGGTCAAGTTGCAAGGTTCAAAATTAACAATAATCCAGTGGGTCCCACACACGTTAACATGTTTCAGCAAGAAGTGAAAAAGAAGCAAGAGTGTGGTTCGGTTTGGGAAACGGATCGTGATTGGTTGATTCAACAACAACGGTTACTGATTCATAACAGAAGACGTGAACTTGGTTATGAGAGTATTGGAAGATGTAACGTTCCGTTATCTTTTCAATCACAGCAACAAAACCAACGGGTTCAATTTGGACCCGGTGGATCCGGGTTTCGGGTTCCGGTTTCTTCTGTGAAAAAGGTTTCTGGTGGAACCGGTGTGTTTTTACCTCGTCATTATGATAATAATAATACTCCTACACCTTCAGATTCACGAAAGAAAACTGGTTGTGGACCTGTTATTTTACCGGCTAAGGCGGTTAATAATTGTTTTAACTCCAACATTGATGATGTTAATGTTACTAATCAACAGCGTTTAGCTAATGTTTTTGCTAATGATTATGATTTGTTATTGGCTAGGCGAAACGCGCTTTTGAAGCAGCAGATTTTACTTGCACGGCGGGAAGAAGCTGCTGGCTGTGAAATTCGTTTACCTCAAGAGTGGACTTATTGA 1053 0.4444 MATKQPLWSSPTEFDAAFGFPTEFPYEFELSSPAVESVTSTDSTENSDEEENSFFFGLTQRLSQSTLHETRNQLTTEPITTWNNKPESKSHSIKTRDVAGSPQSILSGIGSWSGRSNGSGDGSPNGNSRVPSPVTAPFVDPWDVIYAAAGQVARFKINNNPVGPTHVNMFQQEVKKKQECGSVWETDRDWLIQQQRLLIHNRRRELGYESIGRCNVPLSFQSQQQNQRVQFGPGGSGFRVPVSSVKKVSGGTGVFLPRHYDNNNTPTPSDSRKKTGCGPVILPAKAVNNCFNSNIDDVNVTNQQRLANVFANDYDLLLARRNALLKQQILLARREEAAGCEIRLPQEWTY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01991 350 MobiDBLite consensus disorder prediction 95 132 - -
Trre5g01991 350 MobiDBLite consensus disorder prediction 70 134 - -
Trre5g01991 350 MobiDBLite consensus disorder prediction 70 88 - -
Trre5g01991 350 MobiDBLite consensus disorder prediction 32 51 - -
Trre5g01991 350 PANTHER TIP41-LIKE PROTEIN 12 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01991 Trre-Chr5 14819276 14820625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01991 - - tpra:123899547 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01991 5 14819276 14820625 Trre9g04283 9 50690521 50692002 ECH
Trre5g01991 5 14819276 14820625 Trre5g01991 5 14819276 14820625 ECH
Trre13g01499 13 12124050 12126029 Trre5g01991 5 14819276 14820625 ECH
Trre5g01991 5 14819276 14820625 Trre13g01499 13 12124050 12126029 ECH
Trre5g01991 5 14819276 14820625 Trre9g04283 9 50690521 50692002 PCT