Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01499 ATGGCTGAAAACTTAGCTGACGGAGAGTTCTGGCTACCACCACAGTTTCTCTCCGACGATGATGACTCAACCACCGTACCCTTTTCACCAAAACACAAACCTTCTTTGTTCCTTGACAATGACGAAAATACCCTGCCTTTTCCCTCTGAGTTTCCTTATGGTTTCTCTTCCTCTGATCTCAGTTCCCCTATCGACTCTCTCGTTGGCTCAAGCGAAACCGAAAGCGACGAAGATGAACAACTCGCCTCTGAGATAACTCGTCACATGGCTCTCACCATTCTCCAAGTTGATTCCAAAGAAACTGAAAACAATAACATGGGTCGTTTTAAGACAGGTTCACCACAGTCAACACTATGTGCTATTGGGAGTGGCTGTAACTGCCGCAAAGGTTCAAGTCAAGGGAGTAGTCCTAATGGTGTTTGTGAAGATTCTTCTGCAAGGGCTACTTGGGATCTATTGCATGCTGCTGCTGGTGAAGTTGAAAGAATGAGATTGAATCAACAAAGTTATAATCTTTCAAATACCACCACCAATGAAAAAATCTTTGTTCCTCAAACAAAAACTTCTCCTGTTACTGTTACTTTACCCTCCAAAAACAACGCTGTTTCAACCAATCATGAAATGAGTTTTTTCACTCAACCATCACTTTCTCACCAGCAATTGCAAATTGCTCAATTTCAGATGATGAGGCAGCAACAAATGGCAAAAAATCAGAACTCAATATGGGGAGGTATGGAGAAGCAATGTGGGGGTGTATTTCAACAGAGACAAACAAACAAAATGACACCAAACAGAGGAAGAAATGGTGTTGCTGGAAGAAACAATGGTGCTTTAGGTTTGTCTTCATCTGCATGGCCAACACTTCAACATGCTAAACATCAACAAATTCAAAATCAACAATATGGGTCTGGAATGAGAGCTGTTTTTCTTGGAAACAATTCTGGTAGAAGAGAAAGTACTGGTACTGGTGTATTCTTACCTCGTCCTGTTGAATCAAGGAAAAAACCAGCTTGTGCAACTGCTTTGGTACCAGCTAGAGTGGCGCAGGCCCTAAATCTACAGCTTGATGGCCAGCCGCAACATCACTTGCATCGTTTTAATTCCACCCCTAATGTTGAAAATGCAGCTGCGCCTAGGTTAAGGGGTAATTATGTCATTTCACAAGAGAAGAGCAGCAGCAATAACATCAGCAGCAGCAGGCCACAGCCAGCAGTGAGCAATGAAATTGAGCTACCACAGGAGTGGACTTACTGA 1254 0.429 MAENLADGEFWLPPQFLSDDDDSTTVPFSPKHKPSLFLDNDENTLPFPSEFPYGFSSSDLSSPIDSLVGSSETESDEDEQLASEITRHMALTILQVDSKETENNNMGRFKTGSPQSTLCAIGSGCNCRKGSSQGSSPNGVCEDSSARATWDLLHAAAGEVERMRLNQQSYNLSNTTTNEKIFVPQTKTSPVTVTLPSKNNAVSTNHEMSFFTQPSLSHQQLQIAQFQMMRQQQMAKNQNSIWGGMEKQCGGVFQQRQTNKMTPNRGRNGVAGRNNGALGLSSSAWPTLQHAKHQQIQNQQYGSGMRAVFLGNNSGRRESTGTGVFLPRPVESRKKPACATALVPARVAQALNLQLDGQPQHHLHRFNSTPNVENAAAPRLRGNYVISQEKSSSNNISSSRPQPAVSNEIELPQEWTY 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01499 417 MobiDBLite consensus disorder prediction 388 417 - -
Trre13g01499 417 MobiDBLite consensus disorder prediction 1 43 - -
Trre13g01499 417 PANTHER TIP41-LIKE PROTEIN 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01499 Trre-Chr13 12124050 12126029 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01499 - - tpra:123888451 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01499 13 12124050 12126029 Trre13g01499 13 12124050 12126029 ECH
Trre13g01499 13 12124050 12126029 Trre5g01991 5 14819276 14820625 ECH
Trre13g01499 13 12124050 12126029 Trre9g04283 9 50690521 50692002 ECH
Trre5g01991 5 14819276 14820625 Trre13g01499 13 12124050 12126029 ECH