Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01883 ATGTCCACAAAAATGAGCTCCAAAATTAAATCACTAGAAAAATCTATAAACTCTTTGCATTCTGAATTTTCTAAAATTAGGACTATTGTTTTAGATATCAAAGAGTTCTTTGATGAGTGGAAGGAGAAGCACAGTGTTGAAGAATCAGAACGGAACAGTGATGAAATGCAAAGTTCAGAATCCGAAGAACAATGCCGTCCTCTTGGATGGATTGTCAAAGACAAACAACGTTTCAAGGAAAAACTTCGTGTTAAAACAAATGAGCTTGAAAAGCTGGAATTGGAGATTCGGAACCTAAATGCATCACTAAATCTGTTGAAGGACTTTGAAATTGAAGAGCTTACGAAGAAGTCAGATGCATTGAAGATGGATTTAAGAAACAAAGAGGATACACTTCATGAGTTAGAAGAATCTAATAGGAGACTAATCATTAAGGAGAGTAAGAGTAACGATGAGTTGCAATATGCTCGAAAAAATTTGATTAATACCATTAAAGAAATATCAACTTTGGATGACCATATTGGTGTGAAAATGGGGGAATTCAATACCAAATCATTCATTGATGCTATGAAAAAAAGATACAATGAGGATGAAGCTGAACTTAGAGGTGAAGAATTGTGGTCATTGTGGGAAGAGAATATAAATGACCCAAATTGGAATCCATTCAAAGTTGTTTTTGTTTATGGAGTACCTAAGCAAGTTATAATTAACGATGAAGATGACAAGCTAATTGGACTGAAGAAAAAAATTGGTAGCGCTGCATATAATGATGTGGTTGCAGTTTTGATAGAGGCAAATGAAAATAATCCTAGTGGTGAATATCCAATCTTAGAATTGTGGAACTTTGAAAAGAAAAGGCGAGCAACATTACATGAAGGAATCCAGTTTCTGCAGAACTACGAACGCAAGAGGGGGAACGGTCAGAACTACAAACCTGTTAAGGCTAGTGTAATGAGACAAAATAAAGGGAAGGGTCTAGAAACTTACGAGTCGGCAAAAGAGGAGTGGAGGGTCCAACAAGAGACAAAGGAAGGTCATTTTGTTAAGCGTGATGCGAATTATCAAGGAAGACGCAAGAGTAGTAGGAATTGCAAAGCCAATATCACACTAAGGGATTTTATCCCACATGGGTAG 1134 0.3642 MSTKMSSKIKSLEKSINSLHSEFSKIRTIVLDIKEFFDEWKEKHSVEESERNSDEMQSSESEEQCRPLGWIVKDKQRFKEKLRVKTNELEKLELEIRNLNASLNLLKDFEIEELTKKSDALKMDLRNKEDTLHELEESNRRLIIKESKSNDELQYARKNLINTIKEISTLDDHIGVKMGEFNTKSFIDAMKKRYNEDEAELRGEELWSLWEENINDPNWNPFKVVFVYGVPKQVIINDEDDKLIGLKKKIGSAAYNDVVAVLIEANENNPSGEYPILELWNFEKKRRATLHEGIQFLQNYERKRGNGQNYKPVKASVMRQNKGKGLETYESAKEEWRVQQETKEGHFVKRDANYQGRRKSSRNCKANITLRDFIPHG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01883 377 Coils Coil 111 145 - -
Trre5g01883 377 Coils Coil 75 109 - -
Trre5g01883 377 PANTHER RIBONUCLEASE P SUBUNIT P38 38 299 IPR045177 GO:0080188
Trre5g01883 377 Pfam XH domain 177 299 IPR005379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01883 Trre-Chr5 13989685 13991669 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01883 - - tpra:123913369 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01883 5 13989685 13991669 Trre5g01883 5 13989685 13991669 ECH
Trre5g01883 5 13989685 13991669 Trre9g04211 9 49857621 49863528 PCT