Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01684 ATGGCAGAAGAAACCGCACCTGAAGTCGTTGATCCCAACACCACCGTCGCCACCGTCGACATGGACGTTGAAAACACCGTTGAGTCCAAAGAAAAGCGACCGAGGGAAGAAGAAGAAGAGGCATCCAAAGACGAAGATGTCGTTTCGAAGAAACCTAAAGTTGACGAAGATAAGTCAGTAGAAGAACAGAGGTTGGAGAAGTCGGAGAAAAACGAAGATGAAAAAGAAAAGGAAGCATCTGGTGCTGTGAATTTGGGACCTAAAAGCTTTGATTCTTCATTGGAAATGTTTCATTATTTCCACAAATTTCTTCATGCTTGGCCTCAAAATCTCAATGTTAACAAGTACGAGCACACAATGTTGCTGGAATTGCTTAGGAATGGGCATTCAGAACCTGATAAAAAGATTGGCGTAGGGATTTGTGCTTTCCAAGTTCGTGACCATCCTCGCTATAATAGCAGGTGCTATTTCCTCATAAGGGAGGATGACTCTGTTGATGATTTCAGCTTCCGAAAGTGCGTGGATCATATATGTCCTTTGCCAGAAGGGATGCAATTGAAACCTGAGGTGAACAAGAGGCTTGGTGGCGGCGGTGGAAAGCATCATGGTGGCAGAGGAAGGGGTGGAAGAGGAGGTGGTCGTGGAAGAGGAGGAAGGGGGAGATATTGA 669 0.4559 MAEETAPEVVDPNTTVATVDMDVENTVESKEKRPREEEEEASKDEDVVSKKPKVDEDKSVEEQRLEKSEKNEDEKEKEASGAVNLGPKSFDSSLEMFHYFHKFLHAWPQNLNVNKYEHTMLLELLRNGHSEPDKKIGVGICAFQVRDHPRYNSRCYFLIREDDSVDDFSFRKCVDHICPLPEGMQLKPEVNKRLGGGGGKHHGGRGRGGRGGGRGRGGRGRY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01684 222 Gene3D - 79 178 - -
Trre5g01684 222 MobiDBLite consensus disorder prediction 1 85 - -
Trre5g01684 222 MobiDBLite consensus disorder prediction 190 222 - -
Trre5g01684 222 FunFam Predicted protein 79 177 - -
Trre5g01684 222 Pfam Protein of unknown function (DUF3223) 102 174 - -
Trre5g01684 222 MobiDBLite consensus disorder prediction 198 222 - -
Trre5g01684 222 PANTHER PROTEIN EMBRYO DEFECTIVE 514 29 192 IPR044673 -
Trre5g01684 222 MobiDBLite consensus disorder prediction 24 81 - -
Trre5g01684 222 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01684 Trre-Chr5 12211477 12212917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01684 - - cam:101515238 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01684 5 12211477 12212917 Trre5g01684 5 12211477 12212917 ECH
Trre15g04292 15 53486070 53494566 Trre5g01684 5 12211477 12212917 PCT