Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01201 ATGCAGTCTTTAATATACATTCTTTTGGGAGATGTTATTGTCAATCTGAATGGAAAGAAAAGTGATATCATGTGGAGAAAAAGCACATACAGCATACCCCACTTACAAAAATCCACTCAAATGCACTCTGATTGGTCTCTTTGTCATTTGGAGCCAAACAAAGATTCCACTTTGACTTTCAATCCACAAAGACAGGTTCCTAATTACTGTGATTTGATCATGGATTCTCCACAATCTGTTGTGTCACCCTTTAGAACCTCAATCTTGGGTGAAGGTGAGAAGCACAAGTCTGATGTTTTAACACAAAGCAATGGTCCTTCCTCTAAGGACATTGAAGTCAATGGAAAGGAAACTATCATGTCAAATGCCGAGGAATGCGTTGGAGTGCTTGACGTTTACATACATCAGGCTAGAGACATTCAGAACATTTGCATATACCACAAGCAAGATGTTTATGCTAAGCTTTGCCTTACAAGTAATCCTGAGAACACTGTATCTACCAAGACTATCAATGGAGGAGGAAGAAATCCTGTGTTTAATGACAATCTTCGTCTCAATGTTTGGGATGTCGATTCTTCTCTCAAATGTGAGATATGGATGCTTAGCAGGGTGAAGAATTATCTTGAAGATCAGTTGCTCGGTTTTGCTTTGGTACCGTTGTCGGAAGTACTAGTTCAGAATGGGAAACTAGAGAAAGAGTTCTCTCTTTTCTCTCTTTCTTCAACTGATCTTTTTCATTCTCCTTCAGGTTTTGTTCAGTTGTCAATTGCTTATACCGGTGCTACACCAGATGTTATGGCAATATCTGAAATGCCAGGGAAAGTGGCAAATCATGTGACTGTGCAGGACTCAGAAACATCTGAGTCGTTGGCCAGAGATTTGGATAAAATTGAGTTTCCAGATCCTAAGATTGTAAACGAAGACCACTTAATGGTTTCAGAATATTTTGGCATTTCGTGTGACGAGACTCAGTGCTCTGATAGCTTGGCCACTTCTGATGGTGATAATCATAGTTCAGAAGCAGGTGTTCGTCTTGTGGAAAGCTTCTCGGCATGCAGTGAAGAGTCTGTGCAAGTACAACCTCCTAAGGTTGATTCTCCACCGAGCAGTGTTTCAACAAATGGAGTTTCTTCTCCTTCTGCACATGAAAGCTCAGAATCATCTGATGCTGCTGCAGCTTCCAAGTCCCCTGGTAATGAACAAGTTTCAGGCACCGAGCAAGTAAAAAAAGTTGATGTCAAAGAGGGTGAGAGTGATTCGTCAAGTGTTGCTCCGAGTGATTTATTCCCTAAGCCTGTTGTGACTGTGAACATCGAGCCAGAGCCGCAGATGGTGCAGCAGGATATAGTTGACATGTACATGAAAAGTATGCAGCAATTTACCGAATCATTAGCAAAAATGAAGCTTCCTATGGATATTGAAAGTGAACCAACTAGTTCAGGAAATTCAAGTACTGAGCAGAAACTACCACCATCTAACAACGGTACCTCCCGTGTCTACTATGGGAGCAGAGCTTTCTTTTGA 1524 0.4127 MQSLIYILLGDVIVNLNGKKSDIMWRKSTYSIPHLQKSTQMHSDWSLCHLEPNKDSTLTFNPQRQVPNYCDLIMDSPQSVVSPFRTSILGEGEKHKSDVLTQSNGPSSKDIEVNGKETIMSNAEECVGVLDVYIHQARDIQNICIYHKQDVYAKLCLTSNPENTVSTKTINGGGRNPVFNDNLRLNVWDVDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKEFSLFSLSSTDLFHSPSGFVQLSIAYTGATPDVMAISEMPGKVANHVTVQDSETSESLARDLDKIEFPDPKIVNEDHLMVSEYFGISCDETQCSDSLATSDGDNHSSEAGVRLVESFSACSEESVQVQPPKVDSPPSSVSTNGVSSPSAHESSESSDAAAASKSPGNEQVSGTEQVKKVDVKEGESDSSSVAPSDLFPKPVVTVNIEPEPQMVQQDIVDMYMKSMQQFTESLAKMKLPMDIESEPTSSGNSSTEQKLPPSNNGTSRVYYGSRAFF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01201 507 ProSiteProfiles C2 domain profile. 115 234 IPR000008 -
Trre5g01201 507 MobiDBLite consensus disorder prediction 475 500 - -
Trre5g01201 507 PANTHER EXPRESSED PROTEIN 74 507 - -
Trre5g01201 507 SMART C2_3c 129 232 IPR000008 -
Trre5g01201 507 MobiDBLite consensus disorder prediction 354 406 - -
Trre5g01201 507 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 127 260 IPR035892 -
Trre5g01201 507 Gene3D C2 domain 123 288 IPR035892 -
Trre5g01201 507 MobiDBLite consensus disorder prediction 354 428 - -
Trre5g01201 507 MobiDBLite consensus disorder prediction 472 507 - -
Trre5g01201 507 Pfam C2 domain 128 235 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01201 Trre-Chr5 8526591 8531542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01201 - - gmx:100804602 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01201 5 8526591 8531542 Trre5g01201 5 8526591 8531542 ECH
Trre5g01201 5 8526591 8531542 Trre9g05112 9 56643008 56644276 PCT