Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03785 ATGTCGCATCACGGTGGCAACTACAACGAGTCTCCGGTGAAGAGTGAGGTAATCGGAAACGGAACAGTTTCCATTGCGGCGAATTCGAGGCTGAAGCTGAGGGTGAACCCTAACAAGGATCACAAACCAGAAGGTTACGATGATCTGGATTTGGATTTCAGTCCTTCGATTTTCAGCTCGTTGGAGAGACACCTTCCTACGAATTTGCTCGTTATTCCTCGTGATGATAAAGCTAAGTTTATGCGTGAGATTTTGCTTAAGTATCTTCCAAGTGGAGAACGTCACAGAACACAGAAGCATAAAGAATACAGAGAGAAGATCAAATCAAATTATGAGCGTTTACATCGCGAGTTGTACGCTCTGAATCCTACTACATTCTTTGTGCCAACATTTCTGAAAGCAATTAGTGATAACACAGAGCAAAGCTTTAGAAGCATATTAACTGAGCCCTCTCCAGGCATTTATGTATTTCAAATGCTTCAACCAGACTTTTGTGAACTGTTGCTATCTGAGATTGAAAACTTTGAGAAATGGGTGGCTGAAGCAAAATTTCGGATCATGCGTCCCAATAGAATGAATAGATATGGTGCTGTACTTGATGACTTTGGCCTTGAACCGATGCTTGATAGGCTTATGGATGATTTTATTCGTCCTTTATCTAGAGTGTTCTATCCAGAAGTTGGAGGTTCATCCCTGGATTCACATCATGGATTTGTTGTTGAATATGGTGAAGATAAAGATGTTGACTTGGGTTTCCATGTGGATGACTCAGAAGTAACCTTGAATGTTTGCTTGGGCAAGGAATTTTCCGGAGGGGAGTTGTTTTTTCGAGGCTCAAGATGCGAGAAACATGTAAATACAGGAACTAATTCAGAGGAAGTCTTTGATTATTCTCATGTCCCCGGACGGGCTGTGCTTCATCGTGGTCGACATCGTCATGGTGCTAGAGCTACAACATCTGGCCAACGAATCAACCTCCTTATGTGGTGCAGAAGTTCTGTCTTTAGAGAGATGAAACTGTATCAAAAAGATTTCTCCAGCTGGTGTGGTGAATGCAGTCGTATGAAAAAGGAAAGACAGCGCTCCACATGTGCTGCTACTAGATTGGAATTGATCGCAAGAGAAGGTGAATCGACAGCATAG 1143 0.4252 MSHHGGNYNESPVKSEVIGNGTVSIAANSRLKLRVNPNKDHKPEGYDDLDLDFSPSIFSSLERHLPTNLLVIPRDDKAKFMREILLKYLPSGERHRTQKHKEYREKIKSNYERLHRELYALNPTTFFVPTFLKAISDNTEQSFRSILTEPSPGIYVFQMLQPDFCELLLSEIENFEKWVAEAKFRIMRPNRMNRYGAVLDDFGLEPMLDRLMDDFIRPLSRVFYPEVGGSSLDSHHGFVVEYGEDKDVDLGFHVDDSEVTLNVCLGKEFSGGELFFRGSRCEKHVNTGTNSEEVFDYSHVPGRAVLHRGRHRHGARATTSGQRINLLMWCRSSVFREMKLYQKDFSSWCGECSRMKKERQRSTCAATRLELIAREGESTA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03785 380 SMART p4hc 152 331 IPR006620 GO:0005506|GO:0016705|GO:0031418
Trre3g03785 380 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 233 332 IPR005123 -
Trre3g03785 380 Gene3D q2cbj1_9rhob like domain 149 332 - -
Trre3g03785 380 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 26 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03785 Trre-Chr3 48897665 48904575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03785 - - gmx:100816390 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g03785 3 48897665 48904575 Trre7g05935 7 63822118 63829445 ECH
Trre3g03785 3 48897665 48904575 Trre3g03785 3 48897665 48904575 ECH
Trre7g05935 7 63822118 63829445 Trre3g03785 3 48897665 48904575 PCT