Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03750 ATGGTTTTAGGTATGAGAGGAAAGAACATGAGAACTAGCAAAGTTCAAATTGATTACCTAATTCATATTCAAGAGATTAAGCCTTGGCCTCCATCACAATCGTTACGATCCCTCGGTTCTGTTTTAATGGAATTGAAGAATAGTTCTAACACATTATGTTCCACTAAACTTGTTTCACCTTCACTTGGTTCAGTTATAGGTGAAGGAAGAATCGAATTCAATGAATCATTTAGAATTTCAGTGACATTGTTGAGAGATGTATCCATTAGAGGTAGTGATTTTGATGTGTTTCAAAAGAATTTCTTGGAATTCAACTTATATGAGCCAAGAAAAGATAATAAGATTGTTAAGGGTCAAGTATTATTAGGAAATGCTATTGTAGATTTAGCTGATTATGGAATAATTAAAGAGGGATTAAGTATTAGTACATCTTTGAATTGTAAGAGGAGTTATAGAAACAATGATCAACCACTCCTGTTTATTAAGATTCAGCCTGTTGAAAAGATTCGTGTTCGTTCGACGTTGAAGGAACGATTTTCGAATGATGTTTTGGAGGAGAATAGTAATGGTGGTAGCGATTCGGTATCAACGTTGATGAATGAAGAATATGCTGAGGAAGCTGAGATTGCTTCTTTTACTGATGATGATGTTTCTTCACATTCATCTGTGGCAGCAGTTTCTAATTCATTTGAGTCTAGTGGTTTTACACCTCCTAAATTGGATAAGAATGAACCAAATGGACAAATCCAAAAGACTAATTTGAATGACAAGGAACATCATTTGGTTTCACAATCAAGGCTTGAAAACATGAATATAATGCAACAAGATTCATACAAAAAGATGAACAGTTCATCATCAATGGATGCATCTTCTGGTTTTGACTCTTCTTCACCATCTTCAGTTTGTGAAAATTTAGACAAAAATTCTAGAAGCAGAACAAGAAACAATGATCATGAAAATTTGAATGAAAAGGTTGTTCATTCTAGAAATATAGTTGAAGATGTTCAAAGATTAAGTATCAAAAGTAAGATTAATCCAAAGGAAGCAAGAAATGGTAGTTTAGATGGTAAAATTGATTACTTGGAAAACAAGGTAAAGATGCTTGAAGGGGAGTTAACAGAATCTGCTGCTATTGAAGCTGCTTTATATTCAGTTGTTGCTGAACATGGAAACTCTATGAGTAAGGTTCACGCACCGGCTCGACGCCTTTCGAGGCTTTATCTTCATGCATGCAGAGAAAATGTTCAAGGAAGAAAGTACGGCGCAGCTAAAAGTTCTGTTTCAGGATTAGTACTTGTTTCAAAGGCTTGTGGAAATGATGTTCCAAGGTTAACCTTTTGGTTGTCTAATACTATAGTGTTGAGAACAATCATAAGCCGAAATATGAAAGATTTGGTTTCATCAAATCATGGTGGTTCCAATAGGAGAAGAAAATCTGAGGCAGATGGGAATGGCAAGATATCATCCACACAAAGGTGGAAAGAAGGAAAAAATGAAAGTACAGCAACATTGGGATATGAATGTTTTGGTAACTGGGATGATCCACATGTATTCATTTCAGCCTTGGAAAAAGTTGAAGCTTGGATCTTCTCTCGCATAGTCGAATCTATATGGTGGCAGACTCTAACTCCACATATGCAACATGTTGATACAAACTTGACCAACAAGGAAGTAGATTCTTCTTTAAGGAAAAGCTACAAAAGGACATATAGTTCATATGATCAAGATAAGGGTAACTTGTCACTAGATATTTGGAAGAATGCTTTTAAAGAAGCATGTGAAAGGCTATGTCCTATTAGAGCTGGAGGGCATGAGTGTGGCTGTTTACCTATGCTTCATAAATTGATAATGGAGCAATGTGTGGCAAGATTAGATGTGGCTATGTTCAATGCAATTCTGAGGGAGTCTGATGATGAAATCCCAACTGATCCTATATCTGATGCTATAAGTGATCCTATGGTTCTCCCTATTCCACCTGGAAATTCAACCTTTGGTGGTGGTGCTCAGCTTAAAACTCTGATTGGGAATTGGTCTAGATGGTTGAGTGATCTATTTGACATGAATGAAGAGGAGTCACATGAAGAGAAACATGGTTCTAGTAACAATGAGGAGAAACATAACACATCTTTTAAGTCCTTCACTCTTCTTAATGCACTAAGTGACCTCTTGATGCTTCCTAAAGATATGCTATTATGTGCATCCATTAGGAATGAGGTATGCCCCATGTTTAGTGCACCACTTATCAAGAAGATTCTTGTTAACTTTTTACCAGATGAGTTTTGCCCTGATCCAGTTCAACCAACTGTTCTTGAAGCCTTGGACTTGGAGAGTGATGATATAGAAGATGGAAAGGAGTTTCGTAACAACTTTCCATGCACTGCAGCTCCAATTGTCTATTCACCACCGCCGGTAACTTGCGTCGCAAGCATCATCGGAGAGATTGGGAGCAAATCTCAGCTAAGAAGAAACAAATCCGCCGTTGTTAGGAAGTCATACACAAGTGACGATGAGCTCAATGAATTGAAATCACCATTATCTTCGATATTCTTCGGAGATTCCTCATACTCGGTGGTAACAAAATTGAATTCGAAGTCGAGAGAAATTCGCAGTGAGTCTCCAGTTAGATATGATCTTCTTAGGGATGTGTGGATGAATAGCAATTAG 2664 0.3709 MVLGMRGKNMRTSKVQIDYLIHIQEIKPWPPSQSLRSLGSVLMELKNSSNTLCSTKLVSPSLGSVIGEGRIEFNESFRISVTLLRDVSIRGSDFDVFQKNFLEFNLYEPRKDNKIVKGQVLLGNAIVDLADYGIIKEGLSISTSLNCKRSYRNNDQPLLFIKIQPVEKIRVRSTLKERFSNDVLEENSNGGSDSVSTLMNEEYAEEAEIASFTDDDVSSHSSVAAVSNSFESSGFTPPKLDKNEPNGQIQKTNLNDKEHHLVSQSRLENMNIMQQDSYKKMNSSSSMDASSGFDSSSPSSVCENLDKNSRSRTRNNDHENLNEKVVHSRNIVEDVQRLSIKSKINPKEARNGSLDGKIDYLENKVKMLEGELTESAAIEAALYSVVAEHGNSMSKVHAPARRLSRLYLHACRENVQGRKYGAAKSSVSGLVLVSKACGNDVPRLTFWLSNTIVLRTIISRNMKDLVSSNHGGSNRRRKSEADGNGKISSTQRWKEGKNESTATLGYECFGNWDDPHVFISALEKVEAWIFSRIVESIWWQTLTPHMQHVDTNLTNKEVDSSLRKSYKRTYSSYDQDKGNLSLDIWKNAFKEACERLCPIRAGGHECGCLPMLHKLIMEQCVARLDVAMFNAILRESDDEIPTDPISDAISDPMVLPIPPGNSTFGGGAQLKTLIGNWSRWLSDLFDMNEEESHEEKHGSSNNEEKHNTSFKSFTLLNALSDLLMLPKDMLLCASIRNEVCPMFSAPLIKKILVNFLPDEFCPDPVQPTVLEALDLESDDIEDGKEFRNNFPCTAAPIVYSPPPVTCVASIIGEIGSKSQLRRNKSAVVRKSYTSDDELNELKSPLSSIFFGDSSYSVVTKLNSKSREIRSESPVRYDLLRDVWMNSN 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03750 887 MobiDBLite consensus disorder prediction 277 306 - -
Trre3g03750 887 ProSiteProfiles C2 NT-type domain profile. 7 167 IPR019448 -
Trre3g03750 887 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 2 282 IPR021827 GO:0005643
Trre3g03750 887 MobiDBLite consensus disorder prediction 468 496 - -
Trre3g03750 887 MobiDBLite consensus disorder prediction 229 257 - -
Trre3g03750 887 MobiDBLite consensus disorder prediction 277 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03750 Trre-Chr3 48408331 48414723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03750 - - mtr:112422722 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00689 13 5323296 5328137 Trre3g03750 3 48408331 48414723 PCT