Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03346 ATGGATTGTATTTTTACATTAAATAGTGACATTATTTTTGCTCTTTCATTTAAAGGCCCAGAGACGCTCTTACGGCTATCATCAAAGTTTTTTCGTAGTTCATGTGGTTTTGAAGGAGATACTGGAGATGCATTTGAAGCACATCAGTGGAAATGTGTTCGTACAATGTCTGGTGTTAGAATTTTTGAGGATATTACTAGTCACAAGAATGGTAAGGGTATCCTCGCTAAATCGGTTGGTGTTATTGATGCAACTGCAGATAGTGTTTTTGAAGTGTTTTTAAACACGGATCGGAGGAAAAGATATGAGTGGGATATGTTAATGGGTGACTTAGAGCTGATAGAGTCTTACGATGGACATTACGATGTTGTTTATGGGACATATGATCCTAAGTATCTTACCAGATGGCACTCAAAGCGGGATTTTATATTCTCTAGGCAATGGTTTCATGCACAAGATGGAACATACACTATCTTGCAATTTCCAGCAATACATAAGAAAAAGCCGCCGAGATTAGGCTATCGTCGTACAAAAATTAATCCATCTACATGGGAGATTAGAAATTTGAACACACCAATGGGATCAAAGGTACCAAGATGTTTAGTGACCCACACATTAGAGATACAATCTACAACATGGCAACGATGGAAGAATAGCCAGTGCACAAAATTTGAGAAGAGCATCCCTTATGCATTGTTGTGCCAAGTGGCAGGTCTAAAGGAATATATCGGAGCCAATCCGGCACTCCACCAACAAGATGTTGTTACTATCGTTCATTCCAAAATCTCCAATATTTCTTGTTCCGGAGCTGAATATGAAAATGTACAAGTCCAGGAAGAATTTTATGATGCAATCGCTGCAGAGTCATTGACATCAGATGAAGAAAGTGATGAGGACGACGACAATGTTGAAAATAAGAATAGAAAGGTCAAACTAAAGAATATTTCATGCGCCATGACAGCATGTCAACCTTTGCAACCAACAACAGCTCCAAATCTATGCAAAGAGTTAGACTCACTTGCAAGTCCTATAAAATTTGATGCTAGTGATTTTCAAGGTTCTTTGCGGGAAGGAAAGGATGAAAATGACACAAACTGTTGGACGTCTCCTAGTGGTGAAGGTTTTATGATTAGAGGAAAAAACTATCTAAAAGATAATTCTAAGGTAGTTGGAGGAGATCCTCTTCTCAAGCTCGTAGCAGTTGACTGGTTAAAAGTTGAAAAACCCGTAGATAAAGTTGCGTTGCACGGTAGAAGTATGGTTCAGAGTGAAGCTGGGAAAAAGCTTCCATTTATTCTTGTTTTTAATCTCCAGGTTCCAGCTAAACCAAACTACAGTTTGGTTCTATATTATGCATCTGAAAGACCTATAAATAAAGATTCTCTATTGGCTAAATTTATGGATGGAAGTGACATGTTTCGAGACTCAAGATTCAAACTAATTCCAAGTATAGTTGAGGGATATTGGATGGTCAAGAGAGCTGTTGGAACAAAAGCATGCCTATTAGGGAAAGCTGTGACTTGTAAATACTTCGGACAAGATAACTTTTTGGAGATAGATGTGGATATTGGATCATCCTCTGTTGCCAGGAGTGTTGTTGGCCTTGTTCTGGGATATGTAACAAGTCTAGTCGTTGACCTTGCAATTTTGATAGAGGCAAAAGAGGAGGTAGAGCTTCCAGAGTACATTCTTGGAACTGTTCGATTGAATCGCATAAGACTTGAATCTGCTGTACCGCTTGAAGTTTGA 1749 0.3871 MDCIFTLNSDIIFALSFKGPETLLRLSSKFFRSSCGFEGDTGDAFEAHQWKCVRTMSGVRIFEDITSHKNGKGILAKSVGVIDATADSVFEVFLNTDRRKRYEWDMLMGDLELIESYDGHYDVVYGTYDPKYLTRWHSKRDFIFSRQWFHAQDGTYTILQFPAIHKKKPPRLGYRRTKINPSTWEIRNLNTPMGSKVPRCLVTHTLEIQSTTWQRWKNSQCTKFEKSIPYALLCQVAGLKEYIGANPALHQQDVVTIVHSKISNISCSGAEYENVQVQEEFYDAIAAESLTSDEESDEDDDNVENKNRKVKLKNISCAMTACQPLQPTTAPNLCKELDSLASPIKFDASDFQGSLREGKDENDTNCWTSPSGEGFMIRGKNYLKDNSKVVGGDPLLKLVAVDWLKVEKPVDKVALHGRSMVQSEAGKKLPFILVFNLQVPAKPNYSLVLYYASERPINKDSLLAKFMDGSDMFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFGQDNFLEIDVDIGSSSVARSVVGLVLGYVTSLVVDLAILIEAKEEVELPEYILGTVRLNRIRLESAVPLEV 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03346 582 ProSiteProfiles START domain profile. 50 197 IPR002913 GO:0008289
Trre3g03346 582 CDD START 46 204 - -
Trre3g03346 582 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 367 572 IPR009769 -
Trre3g03346 582 Pfam START domain 69 195 IPR002913 GO:0008289
Trre3g03346 582 SUPERFAMILY Bet v1-like 42 208 - -
Trre3g03346 582 Gene3D - 41 233 IPR023393 -
Trre3g03346 582 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 37 581 IPR045096 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03346 Trre-Chr3 42117307 42125443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03346 - - gmx:100786048 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04647 15 57210616 57231751 Trre3g03346 3 42117307 42125443 PCT