Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04647 ATGGACGCAATAACATCGGAGTTGAACAAATCAGGATCGGAGCGAAGTAGTAGCGAAGATAAAGATAGAGGTTATTTTGGTGGTTGGGTTTATCATTTGGGAGTAAATTCCATTGGTCGTGAGTATTGTCATCTTCGATTCCTTTACATTAGGGGAAAGTATGTTTGCATGTACAAACGCGATCCTCATGATAATCCTGCCATTAAACCGATTCGGAAAGGAATTGTAGGCCCGACACTAATGGTTGAGGAGCTAGGTCGCCGAAAGGTCAATGATGGGGATCTTTACGTTTTACGGTTTTACAATCGGTTAGATGAGGCCAGAAAGGGAGAAATTGCTTGTGCTACAGCTGGGGAGGCCCGAGAATGGATAGAAGCATTTGATCATGCCAAGCAACAGGCTGAGTATGAATTGTTAAGAGGTGCTAGTGCCAGAGACAAACTAAACATGGAGACCGAGATCAATCTTGAAGGACATCGGCCTAGAGTGAGACGATATGCCCATGGATTAAAGAAGCTAATAAGAATTGGCCATGGCCCAGAAACACTGTTACGGCAATCGTCAAAGTTGGCTGGTGGTAGGCGAGACGGGTTTGAAGGGGATAGTGGAGACACAGTTGAAGTACATCAATGGAAATGTATTCTTACTGTGGCTGGAATTAGAATTTTTGAGGATGTTTCTGATCACAAGAATGGTAAGGGTGTCCTTGCAAAGTCTGTCGGTGTTATTGATGCAACCGCAGATACTGTTTTTGAAGTGCTTTTGAACACTGAACGACAGAAAAGATATGAGTGGGATATGTTAGTTTGTGACTTAGAGCTTGTAGAATCTTATGATGGACACTATGATGTTGTTTACGGGACATATGATCCTAAGTATCTATCTCGGTGGCATCCAAAACAGGATTTTGTCTTCTCTAGGCAATGGTTTCGTGGACAAGACGGAGCATACACAATCTTGCAATTTCCAGCTATACATAAGAAAAAGCCTCAAAGATCTGGTTATCAACGTGCAAAAATTAATCCATCTTCGTGGGAGATCAGAAATTTGAACTCACCTATGATATCAAATAGCCGAAGATGTCTAGTGACCCACACTTTGGAGATAAATTCTGCATCCTGGAATCGATGGAAGAACAAACGGTGCTCAAAGTTTGAGAGGAGCATTCCTTATGCGTTACTGTGCCAAGTGTCAAGTCTAAAGGAATACATTGCAGCCAATCCAGCACTCCACCAAGAAAATGCCACCACAATAGTTGACTCCAAAATATCTGATACTTCCATTTCCAGTTCTGAATATGAGGATGAAGTACAAGATGAGTTTTATGATGCAATCGCCGCCGAATCATCGTCATCGGATGAAGAAAGTGACGATGATGAGAAGCATGATCTGAAGGAGTCAAGAGTCAAACTAAAGAATGTTTCATGGGCAATCACAGCCTTAGCTTTGAAGCGAAGTGCAGCTCCTGATCTAAGCGGAGAATTGGATCCTCGTGTGACTCCTATCACAATCCATCCAAATGACATACATGGTTCTTTGCGCAAAGGAGTGGATGACAATGACACAAACTGTTGGAGTTCTCCTAGTGGAAAAGGATTTATGATTAGAGGAAAGAACTATCTTAAAGATAATTCTAAGGTAGTTGGAGGAGATCCTCTTCTCAAGCTCATAGCAGTAGATTGGTTTACAGTCAATAAATCTGTAGATAGAATTGCCCTGCATCCTAGGTGTTTGGTTCAGTCAGAAGTCGGCAAAAAGCTTCCATTTATCCTTGTCATCAATCTCCAGGTCCCTGCTAAACCAAACTACAGTCTGGTTCTATATTATGCAGCTGACAGACCGATAAATAAAAAATCTCTGTTGGCTAAGTTTGTTGATGGAAGTGATGTGTTCCGTGACTCAACATTCAAACTTATTCCAAGTATAGTTGAGGGATATTGGATGGTCAAGAGGGCTGTTGGAACCAAAGCCTGCCTGTTAGGGAAAGCTGTGACTTGTAAATACTTCAGACAAGATAATTTTTTGGAGATTGACGTGGACATTGGATCATCCTCTGTAGCTAGGGGTGTCATTGGGCTTGTTCTAGGATATGTTACAAGCCTAGTTGTTGACCTTGCCATTTTGATAGAGGCAAAAGAAGAGGCAGAGCTGCCAGAATACATTCTTGGAACTGTCCGATTAAACCGTTTGAAACTTGAATCTGCCATACCATTGGAGGATTAA 2223 0.4193 MDAITSELNKSGSERSSSEDKDRGYFGGWVYHLGVNSIGREYCHLRFLYIRGKYVCMYKRDPHDNPAIKPIRKGIVGPTLMVEELGRRKVNDGDLYVLRFYNRLDEARKGEIACATAGEAREWIEAFDHAKQQAEYELLRGASARDKLNMETEINLEGHRPRVRRYAHGLKKLIRIGHGPETLLRQSSKLAGGRRDGFEGDSGDTVEVHQWKCILTVAGIRIFEDVSDHKNGKGVLAKSVGVIDATADTVFEVLLNTERQKRYEWDMLVCDLELVESYDGHYDVVYGTYDPKYLSRWHPKQDFVFSRQWFRGQDGAYTILQFPAIHKKKPQRSGYQRAKINPSSWEIRNLNSPMISNSRRCLVTHTLEINSASWNRWKNKRCSKFERSIPYALLCQVSSLKEYIAANPALHQENATTIVDSKISDTSISSSEYEDEVQDEFYDAIAAESSSSDEESDDDEKHDLKESRVKLKNVSWAITALALKRSAAPDLSGELDPRVTPITIHPNDIHGSLRKGVDDNDTNCWSSPSGKGFMIRGKNYLKDNSKVVGGDPLLKLIAVDWFTVNKSVDRIALHPRCLVQSEVGKKLPFILVINLQVPAKPNYSLVLYYAADRPINKKSLLAKFVDGSDVFRDSTFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFLEIDVDIGSSSVARGVIGLVLGYVTSLVVDLAILIEAKEEAELPEYILGTVRLNRLKLESAIPLED 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04647 740 MobiDBLite consensus disorder prediction 1 21 - -
Trre15g04647 740 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 40 739 IPR045096 -
Trre15g04647 740 ProSiteProfiles START domain profile. 211 370 IPR002913 GO:0008289
Trre15g04647 740 SUPERFAMILY Bet v1-like 205 374 - -
Trre15g04647 740 Gene3D - 205 406 IPR023393 -
Trre15g04647 740 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 525 730 IPR009769 -
Trre15g04647 740 Pfam START domain 232 365 IPR002913 GO:0008289
Trre15g04647 740 CDD START 210 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04647 Trre-Chr15 57210616 57231751 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04647 - - gmx:100801191 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04647 15 57210616 57231751 Trre15g04647 15 57210616 57231751 ECH
Trre15g04647 15 57210616 57231751 Trre3g03346 3 42117307 42125443 PCT