Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03294 ATGCCATGCTTCACATCAAACCCTTCTTTTCTCTTCCTTCTTTTTTCTCTCTCTCTTTTCTTTCTCTCCACCAATTCTAAAACCCCTCATTTCCATTCCTTACGTATTCCAGATGGTGTTGAGGTTGATGGTGAGAGAAACTATAACGAGGTTTTACCATGGAAAACGAGGAGATCTATGGCGGAAGATGCTGTTTTGCCAAACTCTTCTTTAATATTGGCTCAAGAACGAACAACAAGAAAGGACCCTCTTGATCATTTCAACATTTACAATGGTGGTTGGAATATCAGCAATCAGCATTATATAGCCTCTGTAGTTTTTACTGCAGTTCCATTCTTTATTGTTGCTGCAGTATGGTTTGTGATTTTTGGGCTTACTTTGTGCATCATATGTTTGTGTTACTGCTGTTGTCGTAGAGAGCCTTATGGCTATTCACGTTTGGCGTATGCTTTGTCCTTGGTCTTCCTCATTCTCTTCACCCTTGCAGCAATAGCTGGATGCATTGTACTATACACTGCTCAAGGGAAGTTTCATGAAAGCACCTCGAAAACACTGGAATATGTAGTCAGCCAAGCTGACTTCACTGCCGAAAACCTCAGGAATGTGTCAGATTATCTCGATGCAGCCAAGAATATTGGAGTTGATGCTGTTTTTTTGCCTGCCGATGTTCAGAAGAACATAGATACCATAAAAACCAAAATTAATTCTTCTGCCATTGAACTTTCCACCAAGACTCATGAAAATGCGGAGCAAATACAAAATGGCCTAGATGGAATGAGATTGGCTCTGGTTATTCTTGCTGCTGTTATGCTCTTTATTTCTTTTCTCGGATTCATATTTTCGATTTTTGGGCTACAAGGTCTTGTATACTTTTTGGTATTTTTCGGATGGTTTCTTGTGGCGGGAACATTTATACTGTGTGGTGTATTTCTTTTTCTTCACAATGCCGTTGCCGATACATGTGTTGCCATGGATGAGTGGGTTCAGCATCCTACTGCACATACAGCCTTAGATGAAATTCTTCCATGCGTGGATAACGCAACTGCCCAGCAAACCCTTAAACAAAGCAGGGACGTGACGAGCCAACTAGTTATGTTGGTTGACAAAGTCATTTCCGATGTCGCAAATAAAAATTTTCCGCCTCAAGCTGGACCTGTGTATTACAATCAATCAGGCCCCCTCATGCCTGTTCTCTGCAATCCGTATAATCCTGACCTCACAATTCGAACCTGTGGTTCAGGGGAGGTTGCACTGGATAATGCTACTGAGGTCTGGAAGAATTATACATGCGAGTTGTCTCCGACAGGCTTTTGTAAGACGCCTGGTCGGATGACCCCGGCTATTGCTGCCCAAATGGAAGCTGCTGTGAATGTAAGCTATGCCTTATATCATTATGTTCCATTCTTGGTTGAGCTACAAGACTGCACTTTCGTTCGACAAACATTCACAGATATAAGCAACAAGTATTGTCCCGGTCTGCGCCATAACAGTCGATGGATTTATGTCGGATTAGTCGTAGTATCTGCTGGTGTTATGTTGTCTTTGATCCTATGGGTCATTTATGCAAGAGAGCGGCGGCATCGTGTTTACGCCAAACAGTTCATTGCTGGATAA 1614 0.4232 MPCFTSNPSFLFLLFSLSLFFLSTNSKTPHFHSLRIPDGVEVDGERNYNEVLPWKTRRSMAEDAVLPNSSLILAQERTTRKDPLDHFNIYNGGWNISNQHYIASVVFTAVPFFIVAAVWFVIFGLTLCIICLCYCCCRREPYGYSRLAYALSLVFLILFTLAAIAGCIVLYTAQGKFHESTSKTLEYVVSQADFTAENLRNVSDYLDAAKNIGVDAVFLPADVQKNIDTIKTKINSSAIELSTKTHENAEQIQNGLDGMRLALVILAAVMLFISFLGFIFSIFGLQGLVYFLVFFGWFLVAGTFILCGVFLFLHNAVADTCVAMDEWVQHPTAHTALDEILPCVDNATAQQTLKQSRDVTSQLVMLVDKVISDVANKNFPPQAGPVYYNQSGPLMPVLCNPYNPDLTIRTCGSGEVALDNATEVWKNYTCELSPTGFCKTPGRMTPAIAAQMEAAVNVSYALYHYVPFLVELQDCTFVRQTFTDISNKYCPGLRHNSRWIYVGLVVVSAGVMLSLILWVIYARERRHRVYAKQFIAG 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03294 537 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 65 526 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03294 Trre-Chr3 41244474 41248419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03294 - - gsj:114387485 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g03294 3 41244474 41248419 Trre3g03294 3 41244474 41248419 ECH
Trre15g04619 15 56893442 56898291 Trre3g03294 3 41244474 41248419 ECH
Trre15g04619 15 56893442 56898291 Trre3g03294 3 41244474 41248419 PCT