Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04619 ATGTTCATTTTTACATCAAGTCCTTCTTTTCTTATTTTCTTCATCTCCTTCTTTCTTCTCTACTCTACTTCCGGAATTTCCATTCATGTCCACTCATCCCATCTACCAGATGGTGTCAAAATCATTGGTGATAAACACATTGATGAGAAGTTATCATGGATGGCATGGAAATCAGTGGCTATAGAAGGTGGTCAAGCAAATACAACTCTTGTGCTTGCTAGGGAAAGAACTCGTCGAATAGATATTTTCAACCATTTTGAATGCTACAATGGTGGCTGGAATATCAGCAATCCTGATTATATTTTGTCTGTTGTTTCTACTTCAATTCCTTTCTTGGTTGTTGCTGCAACATGGTTTGTAATATTTGGGATTATTTTGCACATCAGTTGTGTGTGTTACGGCTGTTGTTCTGGAGACCCTTATGGCCATTCTCAACTAGCTTATTATGCATCACTCATCTTCCTTATCCTATGTACCATTGTGACAATAGGTGGATGTATTGTTTTGTACTATAGTGAACAACAATTTCATGGAACCACATCAAACACAATGAAGTATGTGGTGAATCAAGTTGAATTCACAGAAGAAAACCTAAAGAACGTTTCAAACTATTTGGATTCAGCTAAGAAGATTGCTATTGAACTTGGTTTACCACCAAATGTTGAAAAGAGCATTGATAGTGTTAAAAACAAAATTATGGTTACCACTAATGATCTTTCTAAGAAGACCAGCAATAATTCAAAAATGTTACACAATGGCTTTGATGGAATGAGATTGGCTCTAATCATTGTTGCTATATCTATTCTTATTGTCTCAATTCTTGGATTTTTAACTTCAATACTTGGGTTGAAGTGTATTTTATACTCCTTAGCAGTTGCTGGATGGATTCTTGTTGCAGGAACATTTATATTTTGTGGTGCATTTGTTTTTCTTCATAATGTGATTGGTGATACTTGTGTTGCCATGGATGAGTGGGTTCTGAACCCAACAACTCATACAGCCTTGGATGAAATTATTCCTTGCATGGAAAATGAAACAGCCCGTGAAATCTTTTTACAAAGCAAGTCTATTGTATTTCTTCTTGTTAACTCTGTTAACAACATGATTTCCAATGCCTTGAATGGAAATATCATATCTCAAAATCAATCAGCCCCCCATGGCCATTTGCCTCTTCTTTGTAATCCATTCAATAGTGACTTTACAGTTCGACATTGTGCAGCTGAGGAAGTTGCACTTGAAAATGCCATTGAGGTGTGGAAGAGTTATATTTATCAAGTTTCTCCATCAAATAGTATGATTGGTCGCATAACTCCATCCATGTACACACAACTTACTACTATAGTGAACGTGACCTATGGTTTATATCACTATGGACCATTTTTGGTTGATTTAATAGACTGTACTTTTGTTCGGAAAACATTCAATGACATCAACAACAAGTATTGCCCTGGTCTTCAGAAATATACTAGACATATTTATTTGGGATTGGTTGTGGTATCTATAGCTGTAATGTTGTCTTTGATATTTTGGATTGTCTATGAGAGACATATTCATCATCGTCATTACATCAAAATGTCGTAA 1581 0.3555 MFIFTSSPSFLIFFISFFLLYSTSGISIHVHSSHLPDGVKIIGDKHIDEKLSWMAWKSVAIEGGQANTTLVLARERTRRIDIFNHFECYNGGWNISNPDYILSVVSTSIPFLVVAATWFVIFGIILHISCVCYGCCSGDPYGHSQLAYYASLIFLILCTIVTIGGCIVLYYSEQQFHGTTSNTMKYVVNQVEFTEENLKNVSNYLDSAKKIAIELGLPPNVEKSIDSVKNKIMVTTNDLSKKTSNNSKMLHNGFDGMRLALIIVAISILIVSILGFLTSILGLKCILYSLAVAGWILVAGTFIFCGAFVFLHNVIGDTCVAMDEWVLNPTTHTALDEIIPCMENETAREIFLQSKSIVFLLVNSVNNMISNALNGNIISQNQSAPHGHLPLLCNPFNSDFTVRHCAAEEVALENAIEVWKSYIYQVSPSNSMIGRITPSMYTQLTTIVNVTYGLYHYGPFLVDLIDCTFVRKTFNDINNKYCPGLQKYTRHIYLGLVVVSIAVMLSLIFWIVYERHIHHRHYIKMS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04619 526 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 65 520 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04619 Trre-Chr15 56893442 56898291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04619 - - mtr:11440296 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04619 15 56893442 56898291 Trre3g03294 3 41244474 41248419 ECH
Trre15g04619 15 56893442 56898291 Trre15g04619 15 56893442 56898291 ECH
Trre15g04619 15 56893442 56898291 Trre3g03294 3 41244474 41248419 PCT