Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02611 ATGGCAGAAGAATTTTCAAAAGCGGTTGAAGAAGGAATAAAATTATCAAAACGAATATATTTCGGTAATGACAGAGCAGTAACACCACCAAAACCACCAACAACAATGGTGAAATCAAACACTGCTTTTTTACCAACATCACCTATGGTTTATGCGGTTATTCATGATCCTTCAATTGTTGATAATCCTGATATACCTAGTTATCAACCTCATGTTCATGGAAGGTGTGATCCTCCTGCGCTTATTCCTCTTCAAATGATTAATAGTGTTGATTGTAAGGTTGATTGTTATTTGGATAATGCTTTTGTTGAGGTTGTTGGTTCTTGGAGGCTTCATTGTGTTTCTGGGAGTAGGTTTTGTGATTGTGTTGTTGTTGTTCCTATGGGTTCTCAGGGTTCAATTCTAGGTGTGGAAGTCAGTGTTCATAGGAAATCATATTCTACTCAACTGGTTGATATGGAATACAAAACTGGTGGCAAGGAGAATGTGCCGACTCAAGATGGAGGCTTTCTCAAGCCGAATGTGTTTACTTTGACTATACCGCAGATAGATGGAGGTTCAAATTTATCAATTAAACTTAATTGGTCCCAAAAGATAATATGCGGCAATGATGTGTTCTCCTTGAACGTGCCATTTAACTTTCCGGATTTCGTCAACCCTGCTGGGAAGAGAATGTCTAAAAAAGAAAAGATACAGATAAACGTGAATGCTGCTACCGGTAGCGAGGTTACGTGCAAGACATCAAGTCATCCAATGAAGGAAGTAAGACGCAATGCTGGGAGCATAGGTTTCTCACATGAGACTGATGTTCTCTCCTGGTCGAAAAATGATCTTAACTTCTCATATGCGGTATCTTCAAGTCAAATAAATGGTGGTTTTTTTTTGGAATCTGCATCTGTGGATGATGTTGACCAGAGAGAGATGTTTTGCATGTACCTTTCTTCTGGAAATCTTCAGAATACGAAGGTATTCAGAAAAGACATTGTGTTCGTTATTGACATAAGTGGAAGCATGCGAGGAAAATTAATCGAAGACACAAAGAATGCATTATCAGCTGCTCTCTCTAAACTTGATCCCGATGATTCATTTAGTATTATAGCATTTAATGGAGAGATATATCAGTTTTCAACTTCAATGCAAATGGCTTCGAAGGATGCTGTTGATAGGGCCGTTGAATGGATCAATATAAACTTTGTTGCCGGGGGTGATACAGATCTTTTGCATCCATTGAACATGGCAATAGAGATGCTATCAAATGTCCGAAGATCAGTTCCAATTATTTTCCTAGTTACAGATGGAACTGTTGAAGATGAGAGACAAACTTGTGATATGATAAAGAATAAGATCACAGGAGAATCAATATTCCCCCGACTTTATACTTTCGGCATAGGTTCATTCTGCAATCAATATTTCTTGAAGATGCTTGCTATGATTAGTCGGGGCCAACATGTTGCAGCATTAGATGTAGATTTGGTTGAGCCTCAAATGCTAAAACTGTTCGACAAAGCTTCATCTCTTGTTCTTGCAAATATCACAATCGACTTATTGGATGATCTTGATGAATTTGAGATGTACCCTTCACATATTCCAGATCTTTCGTCAAATGGTCCATTGACTCTATCTGGAAAATATAAGGGAAGATTTCCAGAAGTTCTTAAAGTAAAAGGTATCTTGGCCGATTTCAGTAACTTCGAAATAAATTTGGAGTTACAAAATTCTAAGGACATGCCTGTAGAAAGGGTTTTTGCTAGAGACCAAATAGAGTATCTTACTGCTCAAGCATGGCTTACTTCAAGTAAAGAAATAGAACAGAAGATTTCAAAATTGAGCTTACAAACTGGTTTTTTGTCGGAGTATACGCGTATGGCAATTCTTGAGATTGACCGTGTAAAGAAAGCCAAGCAAGCAGATGGAAAAAAGGTATCAAAAAAGAAAAAAGATGCAGAAATCCAAGGAGAGAGACTACTTTTGCTTCCAAAATTAGGTATTGGCTTTGGCAACTTAGCTGCAACTATTGAGAACACTCCACCAGGAGCTGAAGAAAAATTGCCTGATAGTGCAGAAATGTTTGTTAAAGCAGCCTCAGATTGTTGTAGCAAATGCCTAAACCTTTGTTGTTGCATGTGTTGCATTCAATGTTGTACCAAGATAAACAACCAATGTGCAACTGTATTTTCTCAACTTTGTATTGGTTTAGGATGTTACAGTTGTCTCAGCTGTTGTTCAGACATATGCTGTTCTGGAGATGACAGTTGA 2256 0.3794 MAEEFSKAVEEGIKLSKRIYFGNDRAVTPPKPPTTMVKSNTAFLPTSPMVYAVIHDPSIVDNPDIPSYQPHVHGRCDPPALIPLQMINSVDCKVDCYLDNAFVEVVGSWRLHCVSGSRFCDCVVVVPMGSQGSILGVEVSVHRKSYSTQLVDMEYKTGGKENVPTQDGGFLKPNVFTLTIPQIDGGSNLSIKLNWSQKIICGNDVFSLNVPFNFPDFVNPAGKRMSKKEKIQINVNAATGSEVTCKTSSHPMKEVRRNAGSIGFSHETDVLSWSKNDLNFSYAVSSSQINGGFFLESASVDDVDQREMFCMYLSSGNLQNTKVFRKDIVFVIDISGSMRGKLIEDTKNALSAALSKLDPDDSFSIIAFNGEIYQFSTSMQMASKDAVDRAVEWININFVAGGDTDLLHPLNMAIEMLSNVRRSVPIIFLVTDGTVEDERQTCDMIKNKITGESIFPRLYTFGIGSFCNQYFLKMLAMISRGQHVAALDVDLVEPQMLKLFDKASSLVLANITIDLLDDLDEFEMYPSHIPDLSSNGPLTLSGKYKGRFPEVLKVKGILADFSNFEINLELQNSKDMPVERVFARDQIEYLTAQAWLTSSKEIEQKISKLSLQTGFLSEYTRMAILEIDRVKKAKQADGKKVSKKKKDAEIQGERLLLLPKLGIGFGNLAATIENTPPGAEEKLPDSAEMFVKAASDCCSKCLNLCCCMCCIQCCTKINNQCATVFSQLCIGLGCYSCLSCCSDICCSGDDS 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02611 751 Pfam von Willebrand factor type A domain 326 482 IPR002035 -
Trre3g02611 751 SUPERFAMILY vWA-like 326 491 IPR036465 -
Trre3g02611 751 CDD vWA_interalpha_trypsin_inhibitor 324 498 - -
Trre3g02611 751 ProSiteProfiles VWFA domain profile. 327 519 IPR002035 -
Trre3g02611 751 SMART VWA_4 325 504 IPR002035 -
Trre3g02611 751 Gene3D von Willebrand factor, type A domain 326 502 IPR036465 -
Trre3g02611 751 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 3 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02611 Trre-Chr3 26410626 26416582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02611 - - gmx:100820133 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02611 3 26410626 26416582 Trre3g02611 3 26410626 26416582 ECH
Trre15g05116 15 60844029 60850025 Trre3g02611 3 26410626 26416582 PCT