Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05116 ATGGCGGAGGAATTCTGCAGAGCCGTCGACGACGGAATTAAGCTCTCCAAACGTATATACTTCGGCAAAGATAGAGCAGTTGCGCCGCCGAAGCTACCAACTTCCATGGAAAGATCATCAAACGCACTTCTTCCTAAAGCACCAATGGTTTACGCAGTTATCTCCGATCCAGGGATCGTAGATAATCCTGATATAGCTAGCTATCAACCACATGTCTATGGACGGTGCGATCCTCCAGCACTTATACCGCTTCAGATGAACGCAATTGAAATGGAAATTGATTGTTATCTTGATACTGCTTTTGTCACTGTCTCCGGTACTTGGAGACTCCATTGCGTTACCGGTAGCAGCTCCTGTGATTGCCGTCTCGCCATTCCAATCGGCCATGAGGGTTCAATTCTAGGTGTTGAGGTTAATGCACTTAGAAAATCTTATACTACTCAACTGGTAGTTATGGATGAAAACCAAAGTGTTTCACCGGGTCAAAATGGAAGCTTTCTAAAATCAAATATATTTATTTTAACTATACCGCAGATTGATGGGGGTTCAAATTTATCAATTAAAATTAATTGGTCTCAGAAAGTAGTATGCTCCAATGGCGAATACTCTTTGAATGTGCCATTTACTTTTCCTGAATTTATAAACCCTGCTGGGAAGAGAATGGCTAAAAGAGAAAAGATACGGCTGAATGTTGATGTTGTTGCTGGAAGTGAGCTTCTGTTCAAAACAACAAGCCATCCCCTACAGCAAGTGAGACGTCAAGCTGGGAGTATGGGTTTCTTATGTGATAACGATGTTCTCTCATGGTCAAAAGATGATTTTAGCTTTTCTTATGCGGTTTCCTCAAGTCGTATAAATGGCGGCGTTCTCTTGGAATCTGCATCTGTGCATGATTTCGATCAAAGAGAGATGTTCTACATGTATCTTTCTCCTGGAGATATTCAGCATAAGAAGGTATTCAAAAAGGAGATAATATTCATTATAGACATCAGTGGAAGCATGCAGGGAAAGCTAATGGATGACACAAAGAATGCATTACTGTCTGCTCTCTCTAAGCTTAATCCTGATGATTTGTTTACAATTATAGCCTTTAATGGAGAGAGTCAACTATTTTCAAAATCAATGGAATTGGCTTCCAATGATGCTGTAGAAAGGGCCAGTGAGTGGATCAACGCGAACTTTGTTGCTGGAGGCGGTACAAATATTTCCCATCCGTTAAATACGGCAATAGAAATGCTATCCGGTGCTCGAAGTTCAGTTCCAATAATTTTCCTAGTTACAGATGGAACTGTTGAAGACGAGAGACAAATTTGTGCTACGGTGAAAAATCATATGATCAATGGAGAGTCAATATGCCCTCGAATATACACTTTTGGTATAGGTTCATTCTGCAATCATTATTTCTTGCGGATGCTTGCTATGATTGGTAGGGGCCAATATGATGCTGCAGTGGATGTAGATTTGATTGAGCCTCGAATGCTGTCATTGTTTGAAAAAGCTTCATCGCTCATTCTTGCAAATATCAAAATGGACATGTTGGATGAAATTGATCAAGTTGAGGTATTGCCTTCCCATATCCCTGATCTTTCGTCAGAGGGTCCATTGGTTTTATCCGGCAGATACAAGGGAAGTTTTCCTGAAACTCTTAAAGTCAAAGGCATCTTGGCTGATTTCAGTAATTTTGAAATAGATTTGAAGATACAAAAGGATAAGGGCATACCTGTACAAAGGGTTTCGGCAAGAGATCAAATACAACATCTTACTGCTCAAGCATGGCTTTCAGAAAATAAACAATTAGAACAAAAGGTCGCAAAACTGAGCTTGCAGACTGGCTTTACATCTGAGTATACTTGTATGATTATGCTTGAGAATGATCATCTAAAGAAAATCAAGGAATCACCTGGTGCGAAAGATGTGTCAAAAAAGGAGCTTTCTAAGCACGAGGCAAAGGTGCAAGGCCAGAGAACGATTTTACTACCACACCTAGGTATTGGATTTGGCAACTTGAAAGCAACAGCTGAAAATACTCCTCCGGGATATGAACCAGAGCCTGAAATGGCTGAAATCTTTAAAGCAGCCTCAAATTGCTTTGACACCGTGTGTGGTTACTGTTGCTGCATGTGCTGCATCCAATGCTTTTCCAGGATGAACAACCAATGTCTAATTGCATTGAACCAGTTTTGCATTGGTTTGGGATGCCTCGCCTGCCTCGAATGTTGTTCACATATATGCTGTTGTGGAGACGACAACTGA 2253 0.4088 MAEEFCRAVDDGIKLSKRIYFGKDRAVAPPKLPTSMERSSNALLPKAPMVYAVISDPGIVDNPDIASYQPHVYGRCDPPALIPLQMNAIEMEIDCYLDTAFVTVSGTWRLHCVTGSSSCDCRLAIPIGHEGSILGVEVNALRKSYTTQLVVMDENQSVSPGQNGSFLKSNIFILTIPQIDGGSNLSIKINWSQKVVCSNGEYSLNVPFTFPEFINPAGKRMAKREKIRLNVDVVAGSELLFKTTSHPLQQVRRQAGSMGFLCDNDVLSWSKDDFSFSYAVSSSRINGGVLLESASVHDFDQREMFYMYLSPGDIQHKKVFKKEIIFIIDISGSMQGKLMDDTKNALLSALSKLNPDDLFTIIAFNGESQLFSKSMELASNDAVERASEWINANFVAGGGTNISHPLNTAIEMLSGARSSVPIIFLVTDGTVEDERQICATVKNHMINGESICPRIYTFGIGSFCNHYFLRMLAMIGRGQYDAAVDVDLIEPRMLSLFEKASSLILANIKMDMLDEIDQVEVLPSHIPDLSSEGPLVLSGRYKGSFPETLKVKGILADFSNFEIDLKIQKDKGIPVQRVSARDQIQHLTAQAWLSENKQLEQKVAKLSLQTGFTSEYTCMIMLENDHLKKIKESPGAKDVSKKELSKHEAKVQGQRTILLPHLGIGFGNLKATAENTPPGYEPEPEMAEIFKAASNCFDTVCGYCCCMCCIQCFSRMNNQCLIALNQFCIGLGCLACLECCSHICCCGDDN 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05116 750 SUPERFAMILY vWA-like 322 480 IPR036465 -
Trre15g05116 750 CDD vWA_interalpha_trypsin_inhibitor 320 494 - -
Trre15g05116 750 SMART VWA_4 321 501 IPR002035 -
Trre15g05116 750 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 3 748 - -
Trre15g05116 750 Pfam von Willebrand factor type A domain 322 480 IPR002035 -
Trre15g05116 750 ProSiteProfiles VWFA domain profile. 323 516 IPR002035 -
Trre15g05116 750 Coils Coil 589 609 - -
Trre15g05116 750 Gene3D von Willebrand factor, type A domain 321 499 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05116 Trre-Chr15 60844029 60850025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05116 - - gmx:100777542 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05116 15 60844029 60850025 Trre15g05116 15 60844029 60850025 ECH
Trre15g05116 15 60844029 60850025 Trre3g02611 3 26410626 26416582 PCT